NTDB

Overview

Name	tsaP	Type	Machinery gene
Locus tag	J6I33_RS00210	Genome accession	NZ_CP072285
Coordinates	43106..44260 (+)	Length	384 a.a.
NCBI ID	WP_000755285.1	Uniprot ID	A0A0J1DES9
Organism	Acinetobacter baumannii strain KSK11
Function	assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 38106..49260

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J6I33_RS00185 (J6I33_00185)	-	38284..39498 (+)	1215	WP_001177966.1	oxygenase MpaB family protein	-
J6I33_RS00190 (J6I33_00190)	-	39568..39774 (-)	207	WP_000182542.1	hypothetical protein	-
J6I33_RS00195 (J6I33_00195)	-	39828..41915 (-)	2088	WP_001120676.1	TonB-dependent copper receptor	-
J6I33_RS00200 (J6I33_00200)	-	41988..42416 (-)	429	WP_000231983.1	DUF2946 family protein	-
J6I33_RS00205 (J6I33_00205)	def	42453..42983 (-)	531	WP_001196539.1	peptide deformylase	-
J6I33_RS00210 (J6I33_00210)	tsaP	43106..44260 (+)	1155	WP_000755285.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
J6I33_RS00215 (J6I33_00215)	dprA	44281..45411 (+)	1131	WP_001991425.1	DNA-processing protein DprA	Machinery gene
J6I33_RS00220 (J6I33_00220)	-	45462..46031 (+)	570	WP_000633612.1	L-threonylcarbamoyladenylate synthase	-
J6I33_RS00225 (J6I33_00225)	-	46423..47343 (-)	921	WP_000084546.1	DMT family transporter	-
J6I33_RS00230 (J6I33_00230)	-	47449..48099 (-)	651	WP_012300783.1	TetR/AcrR family transcriptional regulator	-

Sequence

Protein

Download Length: 384 a.a. Molecular weight: 42299.18 Da Isoelectric Point: 8.5790

                                >NTDB_id=551541 J6I33_RS00210 WP_000755285.1 43106..44260(+) (tsaP) [Acinetobacter baumannii strain KSK11]

MKKVFNGMVNFHALGIKKHLLALALCTGVAIGTIAEVHATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP

EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQTTNLQPQVRVEALNNSVPVIPLENIKQWLE

NSTILPADSITNTPYVVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGVELLQVASGVAVS

SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGIQVGQ

VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPIKVGSSIQPPQFND

Nucleotide

Download Length: 1155 bp

                                >NTDB_id=551541 J6I33_RS00210 WP_000755285.1 43106..44260(+) (tsaP) [Acinetobacter baumannii strain KSK11]

ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCCTTGGCGCTCTGTAC

AGGTGTCGCAATCGGTACGATAGCAGAGGTTCATGCAACCAGTCCGAACCATAATCCACCCTCACTTAAAAGTAATGCAC

CCAATGTATATGTTGTGAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT

GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCACACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA

TGGGCGTCCTTTAGTCGGTAAAGATGAGGGCGATGGTTGTGTAGGTATTATTCGCCGCTACACTGGGCAAACCACAAACC

TGCAACCTCAAGTTCGCGTCGAAGCATTAAATAATAGCGTTCCTGTTATTCCACTTGAAAATATTAAACAGTGGTTAGAG

AACAGTACTATTTTACCAGCCGACTCAATTACCAACACACCTTATGTGGTTGGTACAGCCGATCAACGTGTACTTGCAGG

AAAAGGCCAGACCATTTACGCACGAGGACAAGGCTTAATTAATGGGCAACGTTATGCCGTCTACCGAGAAGGTGAACCTT

ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGGTTGAGCTACTACAGGTTGCTTCAGGTGTTGCGGTATCT

TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTACGTCGTGGCGATCGTGTTATGCCTGA

AGAACAAGCTACTTTACCAACACTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA

TGGGTTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGATCGCGGTACAACTCAGGGCATTCAAGTAGGTCAA

GTTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACCAAAGAAGTGATTCAACTTCCTGGCCAACAAAT

TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTATGTTTTAGAGAGCGATTTACCAATTAAGGTTG

GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains

Predicted by InterproScan.

LysM domain (LysM)

(57-102)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0A0J1DES9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
tsaP	Acinetobacter baumannii D1279779	98.698	100	0.987

Detailed information NTG0551541