Detailed information    

insolico Bioinformatically predicted

Overview

Name   recP/tkt   Type   Machinery gene
Locus tag   ANG_RS09975 Genome accession   NZ_AP013072
Coordinates   2001251..2003227 (-) Length   658 a.a.
NCBI ID   WP_025272007.1    Uniprot ID   -
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1996251..2008227
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS09950 (ANG_2019) eeP 1996608..1997879 (-) 1272 WP_020999453.1 M50 family metallopeptidase Regulator
  ANG_RS09955 (ANG_2020) - 1998320..1999123 (-) 804 WP_003035312.1 phosphatidate cytidylyltransferase -
  ANG_RS09960 (ANG_2021) - 1999132..1999881 (-) 750 WP_003035391.1 isoprenyl transferase -
  ANG_RS09965 (ANG_2022) yajC 2000226..2000564 (-) 339 WP_003026971.1 preprotein translocase subunit YajC -
  ANG_RS09970 (ANG_2023) - 2000667..2001155 (-) 489 WP_003032284.1 prolyl-tRNA synthetase associated domain-containing protein -
  ANG_RS09975 (ANG_2024) recP/tkt 2001251..2003227 (-) 1977 WP_025272007.1 transketolase Machinery gene
  ANG_RS09980 (ANG_2025) ulaG 2003338..2004429 (-) 1092 WP_025272008.1 L-ascorbate 6-phosphate lactonase -
  ANG_RS09985 (ANG_2026) - 2004591..2006261 (-) 1671 WP_025272009.1 BglG family transcription antiterminator -
  ANG_RS09990 (ANG_2027) - 2006469..2007170 (-) 702 WP_003070771.1 L-ribulose-5-phosphate 4-epimerase -
  ANG_RS09995 (ANG_2028) - 2007172..2008032 (-) 861 WP_003035309.1 L-ribulose-5-phosphate 3-epimerase -

Sequence

Protein


Download         Length: 658 a.a.        Molecular weight: 71201.30 Da        Isoelectric Point: 4.9251

>NTDB_id=55152 ANG_RS09975 WP_025272007.1 2001251..2003227(-) (recP/tkt) [Streptococcus anginosus subsp. whileyi MAS624]
MSNLSVNAIRFLGIDAIEKSKSGHPGVVMGAAPMAYDLFTKQMRVNPEVPNWVNRDRFVLSAGHGSMLLYALLHLSGFQD
VTMDEIKNFRQWGSKTPGHPEFGHTAGVDATTGPLGQGISMATGFAQAERFLAAKYNREGYTIFDHYTYVICGDGDLMEG
VSAEAASYAGLQKLDKLIVLYDSNDINLDGETKDSFTESVRDRYNAYGWHTALVKDGTDLEAINAAIEAAKVSGKPSLIE
VKTVIGYGSPNKQGTNAVHGAPLGAEEAAATRKALSWDYAPFEIPEEVYEDYRVNVAERGKAAYDAWEKLVEEYKQAYPD
LADEVAAIIAGKDPVEIKPEDFPVKETGLSQATRNSSQDALNAAAKVLPTFLGGSADLAHSNMTYIKEDGLQDDAHRLNR
NIQFGVREFAMGTILNGMALHGGLRVYGGTFFVFSDYVKAAVRLSALQGLPVTYVFTHDSIAVGEDGPTHEPIEHLAGLR
AIPNLNVLRPADARETQAAWYLALKSKTTPTALVLTRQNLTVEAGTDFDKVAKGAYVVYETTDGFDTILLASGSEVNLAV
AAAKELEAQGEKVRVVSVPSTDIFDAQDAAYKEAILPNAVRRRVAIEMAATQSWYKYVGLDGAVIGIDKFGASAPAAKVM
EEYGFTVAHVVEVVKNLK

Nucleotide


Download         Length: 1977 bp        

>NTDB_id=55152 ANG_RS09975 WP_025272007.1 2001251..2003227(-) (recP/tkt) [Streptococcus anginosus subsp. whileyi MAS624]
ATGTCAAATTTATCTGTCAATGCCATTCGTTTTTTGGGAATTGATGCTATTGAAAAATCAAAATCTGGTCACCCAGGTGT
TGTCATGGGCGCAGCTCCGATGGCTTATGACTTGTTTACCAAGCAAATGCGTGTGAATCCAGAAGTACCAAATTGGGTCA
ATCGCGATCGTTTTGTATTATCAGCAGGCCACGGCTCTATGCTGCTCTATGCACTTCTTCACTTGTCTGGTTTTCAAGAT
GTCACAATGGACGAAATCAAGAACTTCCGTCAATGGGGTTCTAAGACGCCTGGACATCCAGAATTTGGACACACGGCTGG
TGTAGATGCGACAACTGGACCCCTTGGTCAAGGAATTTCGATGGCAACTGGTTTTGCGCAAGCAGAACGTTTCCTAGCTG
CTAAGTACAACCGTGAAGGCTATACTATCTTTGACCACTATACGTATGTCATTTGTGGTGACGGAGACTTGATGGAAGGC
GTGTCTGCTGAAGCGGCTTCTTATGCTGGACTGCAAAAGCTAGATAAGCTCATCGTTCTTTATGATTCAAACGATATCAA
TTTGGACGGAGAAACGAAGGATTCCTTTACAGAAAGTGTTCGTGACCGTTACAATGCTTACGGTTGGCACACAGCTTTGG
TTAAAGACGGAACAGACTTAGAAGCGATCAATGCAGCGATTGAAGCCGCAAAAGTTTCTGGCAAACCTTCCTTGATTGAA
GTCAAAACGGTCATTGGCTATGGCTCGCCAAATAAACAGGGAACCAATGCTGTTCATGGGGCTCCTCTTGGTGCAGAAGA
AGCAGCCGCTACTCGCAAAGCTCTTTCTTGGGATTACGCACCATTTGAAATTCCAGAAGAAGTCTACGAAGATTATCGGG
TTAATGTTGCAGAACGCGGCAAAGCTGCCTATGATGCTTGGGAAAAACTCGTTGAAGAATACAAACAAGCCTATCCTGAC
TTAGCTGATGAAGTTGCTGCCATTATTGCTGGAAAAGATCCAGTTGAGATCAAACCAGAAGATTTCCCAGTAAAAGAAAC
AGGTCTTTCACAAGCTACTCGTAATTCTAGCCAAGATGCTTTGAATGCTGCCGCAAAAGTTCTCCCAACTTTCCTTGGTG
GCTCTGCTGACCTCGCTCATTCTAATATGACTTACATCAAAGAAGATGGTTTGCAAGATGATGCCCACCGTCTTAACCGC
AATATTCAATTCGGTGTGCGTGAATTTGCTATGGGGACTATTTTGAATGGTATGGCACTTCACGGAGGACTTCGTGTTTA
TGGCGGTACGTTCTTTGTCTTCTCAGACTATGTTAAAGCGGCTGTTCGCTTGTCAGCTCTGCAAGGTTTGCCTGTGACCT
ATGTCTTTACACATGACTCAATCGCAGTTGGTGAAGACGGTCCAACTCATGAGCCAATTGAGCATTTAGCAGGACTTCGT
GCCATTCCAAACCTCAATGTTTTGCGTCCAGCAGATGCGCGTGAAACGCAGGCCGCTTGGTACTTGGCGCTGAAGAGCAA
AACAACCCCGACAGCTCTTGTTCTCACGCGTCAAAACTTGACTGTTGAAGCTGGAACAGACTTTGACAAGGTAGCGAAAG
GCGCCTATGTTGTGTATGAGACAACAGATGGTTTTGATACAATCCTTCTAGCATCTGGTTCTGAAGTCAACTTAGCTGTT
GCAGCTGCAAAAGAGTTAGAAGCGCAAGGAGAAAAGGTTCGCGTTGTCAGCGTACCGTCAACAGACATCTTTGATGCACA
AGACGCTGCTTACAAAGAAGCAATTTTACCAAATGCAGTTCGTCGCCGTGTTGCAATCGAAATGGCTGCAACCCAGTCTT
GGTACAAATATGTCGGACTTGACGGAGCTGTTATCGGCATTGACAAATTCGGTGCTTCTGCTCCAGCTGCTAAGGTAATG
GAAGAATATGGCTTCACCGTTGCTCATGTCGTAGAAGTTGTGAAAAATTTGAAATAG

Domains

Predicted by InterProScan.

Transketolase, thiamine diphosphate binding domain (Transketolase_N)

(3-334)

Transketolase, pyrimidine binding domain (Transket_pyr)

(352-521)

Transketolase, C-terminal domain (Transketolase_C)

(542-650)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

79.604

99.848

0.795

Multiple sequence alignment