Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   LUY93_RS00470 Genome accession   NZ_CP089500
Coordinates   88952..89797 (+) Length   281 a.a.
NCBI ID   WP_001550052.1    Uniprot ID   A0A0H2XGE1
Organism   Staphylococcus aureus strain 3144_IIV_ST8     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 83952..94797
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUY93_RS00455 - 84218..86059 (-) 1842 WP_000077318.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  LUY93_RS00460 metC 86028..87188 (-) 1161 WP_000175846.1 cystathionine beta-lyase MetC -
  LUY93_RS00465 - 87185..88288 (-) 1104 WP_000655692.1 PLP-dependent transferase -
  LUY93_RS00470 spo0J 88952..89797 (+) 846 WP_001550052.1 ParB/RepB/Spo0J family partition protein Regulator
  LUY93_RS00475 - 89954..90835 (+) 882 WP_001077602.1 mechanosensitive ion channel family protein -
  LUY93_RS00480 - 90865..91068 (+) 204 WP_407545493.1 DUF951 domain-containing protein -
  LUY93_RS00485 ychF 91080..92177 (+) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  LUY93_RS00490 - 92263..92454 (-) 192 WP_001052483.1 hypothetical protein -
  LUY93_RS00495 rpsF 92698..92994 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  LUY93_RS00500 ssb 93015..93518 (+) 504 WP_000934798.1 single-stranded DNA-binding protein -
  LUY93_RS00505 rpsR 93570..93812 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32855.86 Da        Isoelectric Point: 10.0091

>NTDB_id=551441 LUY93_RS00470 WP_001550052.1 88952..89797(+) (spo0J) [Staphylococcus aureus strain 3144_IIV_ST8]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGTKVDISIKKSVGKISFEFDSQEDFVRIIEQLNRRYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=551441 LUY93_RS00470 WP_001550052.1 88952..89797(+) (spo0J) [Staphylococcus aureus strain 3144_IIV_ST8]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGAATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAACGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTGCCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTCAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAGCAAGAACGACAGTTGCGA
GAACAGTATGGTACCAAAGTAGATATATCAATAAAAAAATCGGTTGGTAAAATCTCATTTGAGTTTGATTCACAAGAAGA
TTTTGTGAGAATAATTGAACAATTAAATCGTAGGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XGE1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.379

92.883

0.384