Detailed information NTG0551396

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: XeaCFBP3836p_RS16505
• Genome accession: NZ_CP072268
• Coordinates: 3873362..3874420 (-)
• Length: 352 a.a.
• NCBI ID: WP_011348458.1
• Uniprot ID: -
• Organism: Xanthomonas euvesicatoria pv. alfalfae strain CFBP3836
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3868362..3879420

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
XeaCFBP3836p_RS16485 (XeaCFBP3836p_16485)	-	3869464..3871368 (-)	1905	WP_014090959.1	type IV pilus secretin PilQ family protein	-
XeaCFBP3836p_RS16490 (XeaCFBP3836p_16490)	-	3871388..3871921 (-)	534	WP_007974439.1	pilus assembly protein PilP	-
XeaCFBP3836p_RS16495 (XeaCFBP3836p_16495)	-	3871918..3872583 (-)	666	WP_008575845.1	type 4a pilus biogenesis protein PilO	-
XeaCFBP3836p_RS16500 (XeaCFBP3836p_16500)	-	3872580..3873362 (-)	783	WP_011348457.1	PilN domain-containing protein	-
XeaCFBP3836p_RS16505 (XeaCFBP3836p_16505)	comM	3873362..3874420 (-)	1059	WP_011348458.1	pilus assembly protein PilM	Machinery gene
XeaCFBP3836p_RS16510 (XeaCFBP3836p_16510)	-	3874633..3877059 (+)	2427	WP_029820184.1	penicillin-binding protein 1A	-
XeaCFBP3836p_RS16515 (XeaCFBP3836p_16515)	-	3877368..3878018 (+)	651	WP_008575838.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37606.21 Da
• Isoelectric Point: 4.3924

>NTDB_id=551396 XeaCFBP3836p_RS16505 WP_011348458.1 3873362..3874420(-) (comM) [Xanthomonas euvesicatoria pv. alfalfae strain CFBP3836]
MGLLPKSQSPLIGVDISSTAVKLLQLSRSGNRFRVEHYAVEPLPPNAVVEKNIVEVEAVGEAIRRAINRSGSKAKNAAAA
VAGSAVITKLIPMPADLDDSDLEAQVELEATNYIPYPIEEVNLDFEVLGPMPNSPDMVQVLLAASRSENVELRQSALELG
GLTAKVMDVEAFAVENAFALVASELPVAADAVVALVDIGATMTTLSVLRSGRSLYSREQVFGGKQLTDEVMRRYGLTYEE
AGLAKRQGGLPESYEVEVLEPFKEATVQQISRLLQFFYAGSEFNRVDCIVLAGGCAALARLPEMVEEQLGVTTVVANPLA
QMTLGPKVQAHALALDAPALMIATGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=551396 XeaCFBP3836p_RS16505 WP_011348458.1 3873362..3874420(-) (comM) [Xanthomonas euvesicatoria pv. alfalfae strain CFBP3836]
GTGGGGCTTTTACCCAAGAGTCAGTCGCCACTGATTGGTGTCGACATTAGTTCTACTGCCGTGAAGCTCTTGCAGCTATC
GCGCAGTGGGAACCGTTTTCGCGTGGAACATTACGCGGTGGAACCATTGCCGCCGAATGCGGTCGTGGAGAAGAACATCG
TCGAAGTGGAGGCGGTGGGCGAAGCCATTCGCCGCGCCATCAACCGTTCCGGCAGCAAGGCCAAGAACGCGGCCGCTGCT
GTCGCCGGGTCGGCGGTGATCACCAAGTTGATCCCGATGCCGGCCGATCTGGACGATAGCGACCTGGAAGCCCAGGTCGA
ACTGGAAGCCACCAATTACATTCCGTACCCGATCGAGGAAGTCAATCTCGATTTCGAGGTGCTCGGCCCGATGCCCAACA
GCCCGGACATGGTGCAGGTGCTGCTGGCCGCCTCGCGTTCGGAGAATGTGGAACTGCGCCAGTCGGCGCTGGAACTCGGC
GGTTTGACCGCCAAGGTCATGGACGTGGAGGCCTTCGCGGTCGAAAACGCCTTCGCGCTGGTTGCCAGCGAATTGCCGGT
GGCTGCCGATGCGGTGGTGGCGCTGGTGGACATCGGCGCCACCATGACCACGCTGAGCGTGCTGCGCTCCGGTCGCAGCC
TGTATAGCCGCGAACAGGTGTTCGGCGGCAAGCAGCTCACCGACGAAGTGATGCGCCGTTACGGGCTGACCTATGAAGAG
GCTGGCCTTGCCAAGCGTCAGGGCGGCCTGCCGGAAAGTTACGAGGTCGAGGTGCTGGAGCCGTTCAAGGAAGCCACGGT
GCAGCAGATCAGCCGTCTGCTGCAGTTCTTCTATGCGGGCAGTGAGTTCAACCGCGTCGACTGCATCGTGCTGGCCGGCG
GTTGCGCCGCGCTGGCGCGCCTGCCGGAGATGGTGGAAGAGCAGCTCGGCGTGACCACGGTCGTTGCAAATCCGCTTGCC
CAGATGACGCTTGGTCCGAAGGTTCAGGCCCATGCGCTGGCGCTGGATGCGCCTGCATTGATGATCGCCACCGGCCTGGC
CCTGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter baylyi ADP1	51.282	99.716	0.511
comM	Acinetobacter nosocomialis M2	51.136	100	0.511
pilM	Acinetobacter baumannii D1279779	50.852	100	0.509
pilM	Legionella pneumophila strain ERS1305867	47.293	99.716	0.472