Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   B938_RS05715 Genome accession   NC_019842
Coordinates   1116139..1117092 (+) Length   317 a.a.
NCBI ID   WP_007409125.1    Uniprot ID   A7Z3B8
Organism   Bacillus velezensis AS43.3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1111139..1122092
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B938_RS05685 (B938_05455) argF 1112957..1113928 (+) 972 WP_007409130.1 ornithine carbamoyltransferase -
  B938_RS05690 (B938_05460) - 1114004..1114183 (+) 180 WP_003155070.1 YjzC family protein -
  B938_RS05695 (B938_05465) - 1114220..1114405 (-) 186 WP_007409129.1 YjzD family protein -
  B938_RS05705 (B938_05475) - 1114666..1115400 (+) 735 WP_007409127.1 hypothetical protein -
  B938_RS05710 (B938_05480) - 1115483..1116049 (+) 567 WP_007409126.1 hypothetical protein -
  B938_RS05715 (B938_05485) med 1116139..1117092 (+) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  B938_RS05720 (B938_05490) comZ 1117105..1117296 (+) 192 WP_007409124.1 ComZ family protein Regulator
  B938_RS05725 (B938_05495) - 1117325..1117543 (-) 219 WP_007409123.1 hypothetical protein -
  B938_RS05730 (B938_05500) - 1117710..1118648 (+) 939 WP_015239563.1 beta-ketoacyl-ACP synthase III -
  B938_RS05735 (B938_05505) fabF 1118671..1119909 (+) 1239 WP_012117277.1 beta-ketoacyl-ACP synthase II -
  B938_RS05740 (B938_05510) - 1119993..1120778 (+) 786 WP_012117278.1 DUF2268 domain-containing protein -
  B938_RS05745 (B938_05515) - 1120952..1121938 (+) 987 WP_015239564.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35342.99 Da        Isoelectric Point: 4.6686

>NTDB_id=55134 B938_RS05715 WP_007409125.1 1116139..1117092(+) (med) [Bacillus velezensis AS43.3]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=55134 B938_RS05715 WP_007409125.1 1116139..1117092(+) (med) [Bacillus velezensis AS43.3]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACTATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z3B8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.549

100

0.785

Multiple sequence alignment