Detailed information NTG0551275

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: INE83_RS08360
• Genome accession: NZ_CP072239
• Coordinates: 2096205..2097572 (-)
• Length: 455 a.a.
• NCBI ID: WP_005834974.1
• Uniprot ID: A0A078S0N1
• Organism: Bacteroides uniformis strain CL06T03C05
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2091205..2102572

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
INE83_RS08355 (INE83_01677)	-	2094577..2096199 (-)	1623	WP_211475611.1	FAD-dependent protein	-
INE83_RS08360 (INE83_01678)	radA	2096205..2097572 (-)	1368	WP_005834974.1	DNA repair protein RadA	Machinery gene
INE83_RS08365 (INE83_01679)	-	2097694..2098236 (+)	543	WP_005834976.1	carbonic anhydrase	-
INE83_RS08370 (INE83_01680)	-	2098247..2099284 (-)	1038	WP_057282179.1	asparaginase	-
INE83_RS08375 (INE83_01681)	thrA	2099733..2102165 (+)	2433	WP_117703566.1	bifunctional aspartate kinase/homoserine dehydrogenase I	-

Sequence

Protein

• Length: 455 a.a.
• Molecular weight: 50119.04 Da
• Isoelectric Point: 7.1118

>NTDB_id=551275 INE83_RS08360 WP_005834974.1 2096205..2097572(-) (radA) [Bacteroides uniformis strain CL06T03C05]
MAKEKTVYVCSNCGQDSPKWVGKCPSCGMWNTYVEEVVRKEVVNKRPVSGIETAKAKPITLHEIVADDEPRIDLHDAELN
RVLGGGLVQGSLVLIGGEPGIGKSTLVLQTVLRIPEKRILYVSGEESTRQLKLRADRLTSASSDCLIVCETSLEQIYVHI
KNIRPDIVIIDSIQTISTETLESSPGSIAQVRECSASILRFAKETHTAVILIGHINKEGSIAGPKVLEHIVDTVLQFEGD
QHYMYRILRSIKNRFGSTAELGIYEMRQDGLRQVSNPSELLLSQDHEGMSGIAIASAIEGIRPFLIETQALVSSAVYGNP
QRSATGFDIRRMNMLLAVLEKRVGFKLAQKDVFLNIAGGLKVNDPAIDLAVISSILSSNMDTAIEPEVCMAGEIGLSGEI
RPVNRIEQRIGEAEKLGFKRFILPKYNMQGLNTKKIKMELIPVRKVEEAFRALFG

Nucleotide

• Length: 1368 bp

>NTDB_id=551275 INE83_RS08360 WP_005834974.1 2096205..2097572(-) (radA) [Bacteroides uniformis strain CL06T03C05]
ATGGCTAAAGAGAAGACGGTTTATGTATGCAGCAACTGCGGACAAGACTCTCCCAAATGGGTAGGCAAGTGTCCGTCGTG
CGGAATGTGGAACACGTATGTGGAAGAGGTGGTACGGAAAGAAGTGGTGAACAAGCGTCCCGTATCGGGCATAGAGACCG
CCAAAGCCAAACCCATAACCCTCCATGAAATTGTAGCCGATGACGAACCGCGCATCGACCTCCATGATGCCGAACTGAAC
CGGGTACTAGGTGGTGGTCTTGTACAAGGATCTCTTGTTTTGATTGGCGGCGAACCGGGCATCGGGAAATCCACCCTGGT
GCTACAAACCGTACTCCGCATACCGGAAAAACGCATCCTCTACGTCTCCGGCGAAGAAAGTACCCGCCAATTGAAACTGC
GTGCCGACCGCTTGACAAGTGCTTCCAGTGATTGCCTCATCGTATGCGAAACTTCCCTGGAACAGATTTACGTCCATATC
AAGAACATCCGCCCGGACATCGTCATCATCGACTCCATACAGACGATTTCTACCGAAACCCTTGAATCGTCGCCGGGGAG
TATTGCCCAGGTACGGGAATGTTCCGCCTCCATCCTGCGCTTTGCCAAGGAAACGCATACGGCGGTCATCCTTATCGGGC
ATATCAATAAGGAAGGAAGCATAGCCGGCCCCAAGGTACTGGAACATATCGTGGATACCGTACTCCAGTTCGAGGGCGAC
CAGCACTACATGTACCGCATCCTGCGTAGCATCAAGAACCGCTTCGGAAGCACTGCCGAACTGGGTATTTACGAAATGCG
GCAAGATGGATTACGGCAGGTGAGCAACCCATCCGAACTACTGCTGAGCCAGGACCATGAAGGTATGAGCGGCATAGCCA
TCGCCTCCGCGATAGAAGGCATCAGACCGTTCCTCATCGAAACGCAGGCATTGGTCAGCAGTGCCGTATATGGTAACCCA
CAACGCTCTGCCACAGGGTTCGACATCCGCCGCATGAATATGCTGCTGGCCGTATTGGAAAAACGTGTAGGCTTCAAGCT
GGCACAGAAAGACGTCTTTCTCAACATTGCCGGCGGATTGAAAGTGAACGACCCGGCAATAGACCTTGCCGTCATCAGCT
CTATCCTCTCCAGCAACATGGACACGGCCATAGAGCCGGAGGTGTGCATGGCGGGAGAAATAGGTCTGTCAGGTGAAATC
CGTCCAGTGAACCGCATAGAGCAGCGCATCGGAGAAGCAGAGAAACTTGGATTCAAGCGATTCATACTTCCCAAGTATAA
TATGCAAGGACTGAACACGAAGAAGATTAAAATGGAATTGATACCGGTACGGAAGGTGGAAGAAGCATTCCGTGCCCTAT
TCGGATAA

Domains

Predicted by InterproScan.

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

• AAA domain (AAA_25) (72-219)

• Subunit ChlI of Mg-chelatase (ChlI) (341-427)

3D structure

• AlphaFold DB: A0A078S0N1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	50.763	100	0.512
radA	Streptococcus mitis SK321	47.912	100	0.479
radA	Streptococcus mitis NCTC 12261	47.912	100	0.479
radA	Streptococcus pneumoniae Rx1	47.912	100	0.479
radA	Streptococcus pneumoniae D39	47.912	100	0.479
radA	Streptococcus pneumoniae R6	47.912	100	0.479
radA	Streptococcus pneumoniae TIGR4	47.912	100	0.479