Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   LUY98_RS00515 Genome accession   NZ_CP089497
Coordinates   91244..92062 (+) Length   272 a.a.
NCBI ID   WP_061843484.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 3045_IIV_ST8     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 86244..97062
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUY98_RS00490 - 86858..87388 (+) 531 WP_000184383.1 acyl-CoA thioesterase -
  LUY98_RS00495 yfkAB 87651..88802 (-) 1152 WP_001089609.1 radical SAM/CxCxxxxC motif protein YfkAB -
  LUY98_RS00500 - 89026..89187 (+) 162 WP_001005407.1 SE1561 family protein -
  LUY98_RS00505 - 89317..89832 (+) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  LUY98_RS00510 sgtB 90174..90983 (+) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  LUY98_RS00515 recX 91244..92062 (+) 819 WP_061843484.1 recombination regulator RecX Regulator
  LUY98_RS00520 - 92040..92354 (+) 315 WP_000435806.1 YfhH family protein -
  LUY98_RS00525 - 92369..93886 (+) 1518 WP_000535842.1 ABC transporter ATP-binding protein -
  LUY98_RS00530 - 93895..94731 (+) 837 WP_000886471.1 hypothetical protein -
  LUY98_RS00535 - 94992..95969 (-) 978 WP_000379095.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32245.07 Da        Isoelectric Point: 5.9211

>NTDB_id=551268 LUY98_RS00515 WP_061843484.1 91244..92062(+) (recX) [Staphylococcus aureus strain 3045_IIV_ST8]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
LQYVQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=551268 LUY98_RS00515 WP_061843484.1 91244..92062(+) (recX) [Staphylococcus aureus strain 3045_IIV_ST8]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGAATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
TTACAATATGTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAAAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(85-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

98.897

100

0.989