Detailed information    

insolico Bioinformatically predicted

Overview


Name   rexA   Type   Machinery gene
Locus tag   ANG_RS07750 Genome accession   NZ_AP013072
Coordinates   1526136..1529816 (-) Length   1226 a.a.
NCBI ID   WP_025271881.1    Uniprot ID   -
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1521136..1534816
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS07735 (ANG_1570) glgD 1521481..1522620 (-) 1140 WP_003037220.1 glucose-1-phosphate adenylyltransferase subunit GlgD -
  ANG_RS07740 (ANG_1571) - 1522610..1523752 (-) 1143 WP_003025294.1 glucose-1-phosphate adenylyltransferase -
  ANG_RS07745 (ANG_1572) glgB 1523756..1525666 (-) 1911 WP_003037495.1 1,4-alpha-glucan branching protein GlgB -
  ANG_RS07750 (ANG_1573) rexA 1526136..1529816 (-) 3681 WP_025271881.1 helicase-exonuclease AddAB subunit AddA Machinery gene
  ANG_RS07755 (ANG_1574) rexB 1529813..1533085 (-) 3273 WP_025271882.1 ATP-dependent nuclease subunit B Machinery gene
  ANG_RS07760 (ANG_1575) - 1533206..1534420 (-) 1215 WP_025271883.1 ABC transporter permease -

Sequence


Protein


Download         Length: 1226 a.a.        Molecular weight: 141032.83 Da        Isoelectric Point: 5.9199

>NTDB_id=55122 ANG_RS07750 WP_025271881.1 1526136..1529816(-) (rexA) [Streptococcus anginosus subsp. whileyi MAS624]
MKQIPFLSQAEIRALQDQEAQSDKAQKRTPEQIEAIYSSGQNILVSASAGSGKTFVMVQRIIDQILRGVRIDQLFISTFT
VKAASELKERLEKELSKVLKATDDEELKQHLAQQLADIPNADIGTMDSFTQKVLNKYGYLLELAPNFRILQNASEQLLLQ
NEVFEQVFEDFYQSDQATLFKKLVKNFTGQRKDLLGFREQVYKIYAFLQSTSSPIEYLEQDFLKAYAHADFQEEKVRLLT
QTKEALFDLEDFFSYHLVHEAKEFPKAKYLENVQRVLDGLASLQGQSSEEAYLTTLNNIVEISRASNGKALTNSGRKEEL
KEIINAYNEKRKEKIQVLRDLADQFYRFEFQVTYHEEAKEILLVLQQFMKSFVTSYLQRKKEENAFEFADISHFAIQILE
EFPDVRHFYRTKYHEVMVDEYQDTNHTQERMLELLSNGGNRFMVGDIKQSIYRFRQADPQIFNEKFKTYQDDSQQGKLIV
LKENFRSHVEVLEATNDVFKRLMDEEVGEIDYNETHYLVAGNPAKKAPNPQYQTEFLIYDGTLETDNEENDKDVSSVSAG
EVALVIKEIIRLHNEENVPFEDMTLLTASRTRNDVILSEFAKYGIPVVSDGGEDNYLQSVEVMVMLDTLRTINNPLNDYA
LVALLKSPMFTFTEDELARLALQKKVTEATYVTHQENLYEKLKNALSGNGQHPELITPPLLKKIQQFQEILLDWREYAKT
NSLYDLLWKIYQDRFYYDYVGALPNGAGRQANLYALTLRANDYEKMSFKGLSRFIGMIDKILETQNDLASVVSAAPKHAV
RLMTVHKSKGLEFKYVFLLNMDKVFNRKDSSSALILSRQNGVGIKYVADVAVDVADKLAPNHVRLSINTLPYEQNEREIH
LASISEQMRLLYVAMTRAERKLYLVGKGHQKSLEKKSFPTPVKGHLAASIRQSMTSFQDWMWALHVVFEKDNLAFSTHFV
TDSDLTDEKIGQLKLKDAIIEESMVHNRQSEDIRRALDILENVDRLNTKYQAAIRLPSVRTPSQIKKFYEPIMDTDGVEI
MEKRNPTIVGKASFELPNFAKKAPVTGAQIGSAVHELMQRIPLDQAPTIAILRKVLKQVQAEESVKKKIDLQKIASFFGT
ELGQLLLKHTDRVYREAPFAMLKQDPASGQYFVVRGILDGYLLLTDRIILFDYKTDRYTNPSELVERYQAQLALYTEALS
RSYSIEKVEKYLVLLGGAQLQVVKVE

Nucleotide


Download         Length: 3681 bp        

>NTDB_id=55122 ANG_RS07750 WP_025271881.1 1526136..1529816(-) (rexA) [Streptococcus anginosus subsp. whileyi MAS624]
ATGAAGCAAATTCCATTTTTGAGTCAAGCAGAGATTCGTGCTTTGCAGGATCAAGAAGCACAGTCTGACAAAGCTCAAAA
ACGTACACCAGAGCAAATCGAAGCCATTTACTCCTCCGGTCAAAATATCCTTGTATCTGCTTCTGCAGGCTCAGGAAAAA
CCTTTGTTATGGTGCAGCGGATTATTGACCAAATTCTGCGGGGAGTTCGCATTGACCAGCTCTTCATTTCGACTTTTACC
GTTAAAGCAGCCAGTGAATTAAAAGAGCGCTTGGAGAAAGAGTTATCCAAGGTCTTGAAGGCAACAGATGATGAGGAGCT
CAAACAGCACTTGGCGCAGCAATTAGCCGATATTCCGAATGCCGACATTGGAACCATGGACTCTTTTACCCAAAAGGTCC
TCAATAAATATGGTTATCTCCTAGAATTGGCGCCAAATTTTCGCATTTTGCAAAATGCGAGTGAGCAGTTATTGCTACAA
AACGAAGTTTTTGAGCAAGTTTTTGAAGACTTCTATCAATCTGATCAGGCAACTTTGTTTAAAAAATTAGTCAAAAATTT
TACAGGTCAGAGGAAAGATTTGCTTGGTTTTCGAGAGCAGGTTTATAAGATTTATGCTTTTTTGCAATCCACCAGTAGCC
CAATCGAATACTTAGAACAAGATTTCTTGAAAGCTTACGCTCATGCGGATTTCCAAGAAGAAAAAGTGCGCCTTTTAACA
CAAACAAAAGAAGCCCTCTTTGATTTAGAAGATTTTTTTAGCTATCATTTGGTTCATGAAGCCAAGGAATTTCCCAAAGC
AAAATACCTTGAAAATGTGCAGCGTGTGCTTGATGGTCTGGCAAGCTTACAAGGACAATCCTCTGAGGAAGCTTATCTCA
CAACGCTCAATAACATTGTAGAAATATCGCGGGCCAGCAATGGGAAAGCCTTGACAAACAGCGGACGCAAAGAAGAATTA
AAAGAAATTATTAACGCTTATAACGAAAAACGTAAGGAAAAAATTCAAGTTTTACGTGATTTGGCAGATCAATTTTATCG
CTTTGAATTTCAAGTGACCTATCATGAGGAAGCCAAGGAAATCTTGCTTGTCTTGCAGCAATTTATGAAATCGTTTGTGA
CAAGCTATCTACAACGGAAAAAAGAAGAAAATGCGTTTGAATTTGCAGATATCAGTCATTTTGCCATTCAGATTTTAGAA
GAATTTCCTGATGTGCGCCACTTTTATCGGACAAAATACCATGAAGTCATGGTGGATGAGTATCAAGATACCAACCACAC
GCAAGAGCGGATGCTAGAACTGTTATCAAATGGGGGTAATCGCTTTATGGTGGGGGATATTAAGCAGTCTATTTATCGTT
TTCGTCAGGCTGATCCGCAGATTTTTAATGAGAAATTTAAAACCTATCAAGACGATAGCCAGCAAGGGAAATTGATTGTT
TTGAAGGAAAATTTCCGCAGTCATGTGGAAGTCTTGGAAGCCACGAATGATGTTTTCAAACGTCTCATGGATGAGGAAGT
GGGAGAAATTGATTATAATGAAACGCATTATCTGGTAGCTGGAAATCCTGCTAAAAAAGCACCAAATCCACAATATCAGA
CGGAATTTCTCATTTATGACGGAACGCTTGAGACGGATAATGAGGAGAATGACAAGGATGTTTCTTCTGTTTCTGCAGGA
GAAGTAGCGCTGGTCATTAAGGAAATTATCCGTCTGCACAATGAGGAAAATGTCCCATTTGAAGATATGACATTGCTAAC
GGCTTCGCGGACGCGCAACGATGTGATTTTATCTGAGTTTGCCAAATACGGTATCCCAGTCGTTTCAGACGGTGGCGAGG
ATAATTATTTGCAATCTGTAGAAGTTATGGTGATGTTGGATACCCTGCGTACGATTAACAATCCGCTCAATGATTATGCT
TTGGTGGCACTTCTAAAGTCACCAATGTTCACCTTTACTGAGGATGAATTGGCTCGTTTGGCCTTGCAAAAAAAGGTGAC
AGAAGCTACTTATGTTACTCATCAAGAAAATCTTTATGAGAAATTGAAAAATGCTCTGAGTGGGAACGGTCAACATCCCG
AACTCATCACACCTCCTCTTTTAAAGAAAATCCAGCAGTTTCAAGAAATACTGCTGGATTGGCGAGAGTATGCAAAAACA
AATTCACTATATGATTTGCTTTGGAAAATTTATCAAGATCGCTTTTATTACGATTATGTGGGAGCCCTACCAAATGGAGC
GGGACGTCAGGCCAATCTTTATGCGCTGACCTTACGAGCAAATGATTACGAAAAAATGAGTTTTAAAGGCTTGTCACGTT
TTATTGGGATGATTGATAAAATCTTGGAAACACAGAATGATTTAGCCAGTGTAGTCAGTGCAGCTCCGAAACATGCGGTT
CGCCTGATGACGGTTCATAAGAGCAAAGGTTTGGAATTTAAATATGTCTTTTTACTCAATATGGACAAAGTATTTAATCG
TAAAGACAGCAGTTCTGCTTTGATTCTCAGTCGTCAAAATGGTGTTGGAATCAAGTATGTGGCTGATGTAGCAGTAGATG
TTGCTGATAAGTTAGCTCCAAACCATGTTCGTTTGTCTATTAATACTCTGCCTTATGAGCAAAATGAGCGTGAGATTCAT
CTAGCCAGTATTTCTGAGCAAATGCGTCTACTCTATGTCGCCATGACACGCGCTGAAAGGAAACTGTATTTAGTTGGTAA
AGGTCATCAGAAAAGTTTGGAGAAAAAAAGCTTCCCTACTCCAGTGAAGGGGCATTTAGCTGCATCTATCAGGCAAAGTA
TGACAAGTTTTCAAGATTGGATGTGGGCTTTACATGTAGTATTTGAGAAAGATAATCTAGCCTTTTCAACACATTTTGTG
ACAGATAGTGATTTGACGGATGAAAAAATAGGTCAACTGAAATTGAAAGATGCGATTATTGAAGAGAGTATGGTGCATAA
TCGCCAATCTGAGGATATTCGTAGGGCTTTGGATATTTTGGAAAATGTAGATCGACTGAATACCAAGTATCAAGCTGCCA
TCCGTTTACCGAGTGTTCGAACACCGAGTCAAATTAAGAAATTTTATGAACCGATTATGGATACAGACGGCGTTGAAATT
ATGGAGAAAAGGAATCCGACCATTGTAGGAAAAGCTTCTTTTGAGCTACCAAATTTTGCTAAAAAAGCTCCAGTTACAGG
AGCGCAAATCGGTAGCGCTGTCCATGAACTGATGCAGCGTATTCCTTTGGATCAAGCCCCTACGATAGCTATTTTGAGAA
AAGTTTTAAAACAGGTTCAGGCAGAAGAAAGTGTTAAAAAGAAAATTGATTTGCAAAAGATAGCTAGTTTTTTTGGGACT
GAACTTGGGCAGCTCCTTTTGAAGCATACAGACAGAGTATATCGTGAAGCTCCTTTTGCTATGTTAAAGCAGGATCCAGC
AAGTGGACAATATTTTGTAGTCCGTGGGATTCTGGACGGTTATCTACTGCTGACGGACCGAATCATTCTCTTTGATTACA
AGACGGATCGATATACAAATCCAAGTGAATTAGTGGAGCGCTACCAAGCACAATTAGCACTTTATACTGAAGCTCTTAGT
CGTTCATACAGTATTGAAAAAGTTGAAAAATACTTAGTGTTGTTAGGCGGAGCACAGCTTCAAGTGGTGAAAGTAGAATA
G


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rexA Streptococcus pneumoniae R6

60.816

99.918

0.608


Multiple sequence alignment