Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   LUY91_RS00880 Genome accession   NZ_CP089495
Coordinates   136255..137073 (+) Length   272 a.a.
NCBI ID   WP_001124419.1    Uniprot ID   Q8NVU3
Organism   Staphylococcus aureus strain E1202_II_ST496     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 131255..142073
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUY91_RS00845 - 132488..132838 (+) 351 WP_000448198.1 hypothetical protein -
  LUY91_RS00850 - 132898..133074 (+) 177 WP_001823160.1 hypothetical protein -
  LUY91_RS00855 - 133071..133526 (+) 456 WP_000971220.1 hypothetical protein -
  LUY91_RS00860 - 133609..133710 (-) 102 WP_111065334.1 hypothetical protein -
  LUY91_RS00865 - 134037..134198 (+) 162 WP_001005408.1 SE1561 family protein -
  LUY91_RS00870 - 134329..134844 (+) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  LUY91_RS00875 sgtB 135185..135994 (+) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  LUY91_RS00880 recX 136255..137073 (+) 819 WP_001124419.1 recombination regulator RecX Regulator
  LUY91_RS00885 - 137051..137365 (+) 315 WP_000435806.1 YfhH family protein -
  LUY91_RS00890 - 137380..138897 (+) 1518 WP_134944047.1 ABC transporter ATP-binding protein -
  LUY91_RS00895 - 138906..139742 (+) 837 WP_000886468.1 membrane protein -
  LUY91_RS00900 - 140003..140980 (-) 978 WP_000379098.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32241.06 Da        Isoelectric Point: 5.9211

>NTDB_id=551179 LUY91_RS00880 WP_001124419.1 136255..137073(+) (recX) [Staphylococcus aureus strain E1202_II_ST496]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEIFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=551179 LUY91_RS00880 WP_001124419.1 136255..137073(+) (recX) [Staphylococcus aureus strain E1202_II_ST496]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGGTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATTGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATATTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAAGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8NVU3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

100

100

1