Detailed information    

insolico Bioinformatically predicted

Overview

Name   recJ   Type   Machinery gene
Locus tag   ANG_RS06745 Genome accession   NZ_AP013072
Coordinates   1324381..1326615 (-) Length   744 a.a.
NCBI ID   WP_025271846.1    Uniprot ID   -
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1319381..1331615
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS06730 (ANG_1364) - 1322366..1322731 (+) 366 WP_025271845.1 GntR family transcriptional regulator -
  ANG_RS06735 (ANG_1365) - 1322735..1323430 (+) 696 WP_003032516.1 ABC transporter ATP-binding protein -
  ANG_RS06740 (ANG_1366) - 1323448..1324245 (+) 798 WP_003037852.1 hypothetical protein -
  ANG_RS06745 (ANG_1367) recJ 1324381..1326615 (-) 2235 WP_025271846.1 single-stranded-DNA-specific exonuclease RecJ Machinery gene
  ANG_RS06750 (ANG_1368) - 1326722..1327129 (-) 408 WP_003037915.1 GNAT family N-acetyltransferase -
  ANG_RS06755 (ANG_1369) - 1327107..1327844 (-) 738 WP_020999566.1 class I SAM-dependent methyltransferase -
  ANG_RS06760 (ANG_1370) - 1327854..1328609 (-) 756 WP_020999565.1 SDR family NAD(P)-dependent oxidoreductase -
  ANG_RS06765 (ANG_1371) - 1328619..1329227 (-) 609 WP_003037839.1 histidine phosphatase family protein -
  ANG_RS06770 (ANG_1372) rnz 1329260..1330189 (-) 930 WP_003037890.1 ribonuclease Z -
  ANG_RS06775 (ANG_1373) - 1330200..1330829 (-) 630 WP_025271847.1 cystathionine beta-lyase -

Sequence

Protein


Download         Length: 744 a.a.        Molecular weight: 83691.68 Da        Isoelectric Point: 4.4522

>NTDB_id=55113 ANG_RS06745 WP_025271846.1 1324381..1326615(-) (recJ) [Streptococcus anginosus subsp. whileyi MAS624]
MITSKYDWQIATNFSDESFIKKAKKLGLEASVANLVYQRGIQTEEALRDFLEPSLDQLHDPYELHDMDKAVTRIRQAIEN
YEQILIYGDYDADGMTSASIVKEALEQLGAECQVYLPNRFTDGYGPNASVYKYFIENQGISLIVTVDNGVAGHEAIELAQ
SMGVDVIVTDHHSMPEVLPDAYAIVHPEHPEAEYPFKHLAGCGVAFKLATALLEEVQVELLDLVAIGTIADMVSLTDENR
ILVKYGLSVLKNTQRIGLQELFKIAGIQENEVDEETVGFQIAPRLNALGRLDDPNPAIELLTGFDEEEARDIALMINQKN
EERKEIVQKIYDEAKTMIDLNKPIQVLAGEGWNLGVLGIVAGRLLEELHQPVIVLNIENDLAKGSARSIEAVDIFEALDP
HRDLFVAFGGHAGAAGMTLEASKLEALSQVLVAYIEDNQVDLSTKNELFLDEELSLPDLTLETLKNFEKLAPFGMDNKKP
VFYLKDFKIENARTMGAGNTHLKLKISQADAVFEVVAFGLGNLATEFSQTKNLELAVTLSVNKWNGQTSLQLMLVDARVN
GIQLFNIRGKNAPLPENVPVLRFSEEMPNLEKSRAVVVYDLPERLNQLKVIIQQGHFEAIYFKNEIAQPYYLTGFGTRDQ
FAKLYKTIYQFPEFDIRYKLKELAAYLKIDPILLIKMIQIFEELDFVTIQDGVMQVNKKAEKKAIENSHIYQELKKTVKE
QELMALGTVQEIYDYLIEKDEFSN

Nucleotide


Download         Length: 2235 bp        

>NTDB_id=55113 ANG_RS06745 WP_025271846.1 1324381..1326615(-) (recJ) [Streptococcus anginosus subsp. whileyi MAS624]
ATGATTACATCAAAATATGATTGGCAGATTGCCACAAATTTTTCAGATGAGAGCTTTATTAAAAAAGCTAAAAAACTTGG
CTTGGAGGCTTCGGTAGCTAATCTGGTTTACCAGAGAGGAATCCAGACAGAAGAAGCGCTGCGAGATTTTCTAGAGCCTA
GTTTGGACCAGCTGCATGATCCTTATGAATTACATGATATGGATAAGGCAGTGACGCGCATTCGTCAAGCAATTGAAAAT
TATGAGCAGATCTTGATTTATGGCGATTATGATGCGGATGGCATGACTTCGGCTTCTATTGTTAAAGAAGCACTAGAACA
ACTTGGAGCAGAGTGTCAGGTCTATTTGCCCAATCGATTTACAGACGGTTATGGTCCTAACGCGAGTGTTTACAAGTATT
TTATTGAAAATCAGGGAATTTCACTCATCGTTACAGTGGATAATGGAGTTGCAGGACATGAAGCAATCGAACTAGCTCAG
TCTATGGGAGTGGATGTCATTGTGACGGATCACCATTCTATGCCAGAGGTACTTCCTGATGCTTATGCAATTGTCCACCC
AGAACATCCGGAAGCTGAATATCCTTTTAAACATTTAGCTGGCTGCGGTGTGGCTTTTAAGCTAGCAACCGCGCTTTTAG
AAGAAGTGCAAGTAGAGTTGCTAGATTTAGTCGCTATTGGGACTATTGCAGATATGGTCAGTCTAACGGATGAAAATCGC
ATTCTGGTTAAATATGGGTTAAGCGTCCTCAAAAACACTCAACGAATCGGCTTGCAGGAGCTTTTTAAGATTGCAGGTAT
TCAGGAAAATGAAGTGGATGAAGAAACAGTTGGTTTTCAGATAGCCCCTAGACTCAATGCTCTAGGTCGATTGGATGATC
CAAATCCTGCTATTGAACTTCTGACAGGCTTTGATGAGGAAGAAGCACGTGATATTGCTCTGATGATCAACCAGAAAAAT
GAAGAGCGCAAAGAGATTGTTCAGAAGATCTATGATGAAGCAAAAACCATGATTGATCTCAATAAACCTATTCAGGTTCT
AGCCGGTGAAGGTTGGAATCTAGGTGTTTTGGGAATTGTGGCAGGTCGGCTTTTGGAAGAATTACACCAGCCGGTCATCG
TCTTGAATATTGAAAATGATTTGGCAAAAGGCAGCGCCCGCAGCATTGAAGCAGTTGATATTTTTGAAGCGTTAGACCCT
CATCGAGATTTATTTGTGGCTTTTGGTGGGCATGCAGGGGCAGCTGGGATGACTCTAGAGGCCAGCAAGTTAGAAGCACT
CAGTCAGGTTTTGGTAGCATATATTGAAGATAATCAAGTGGATTTGTCCACTAAGAATGAGCTCTTTTTGGATGAGGAAT
TATCCTTGCCAGATTTGACACTAGAGACCCTCAAAAACTTTGAAAAGTTAGCTCCTTTTGGCATGGACAATAAAAAGCCT
GTTTTTTATTTGAAAGATTTTAAAATTGAAAATGCCCGCACCATGGGAGCAGGGAATACTCACCTTAAGCTGAAAATTTC
TCAGGCTGACGCAGTTTTTGAGGTCGTAGCTTTTGGTCTAGGTAATCTTGCAACAGAATTTTCCCAAACTAAAAACTTAG
AGCTGGCGGTTACTCTGTCGGTCAATAAATGGAATGGTCAAACTAGTCTCCAGCTTATGCTGGTGGATGCTAGGGTCAAT
GGGATTCAGCTCTTTAATATCCGAGGTAAAAATGCTCCTTTGCCTGAAAATGTGCCCGTCCTGCGTTTTTCAGAAGAAAT
GCCTAATTTGGAAAAGAGCAGGGCAGTTGTGGTGTATGACTTGCCTGAACGCCTAAATCAGCTCAAAGTAATCATTCAGC
AAGGACATTTTGAAGCAATTTACTTTAAAAATGAGATTGCTCAGCCCTATTATCTGACAGGTTTCGGAACGAGAGACCAG
TTTGCAAAACTCTATAAAACAATTTATCAATTTCCAGAGTTTGACATTCGTTATAAGCTCAAAGAACTAGCTGCTTATCT
CAAGATTGACCCAATTCTACTCATCAAGATGATTCAGATATTTGAAGAGCTGGACTTTGTGACAATTCAAGATGGAGTGA
TGCAAGTAAACAAAAAAGCAGAAAAAAAGGCTATTGAAAACAGCCATATTTATCAAGAACTGAAGAAAACAGTCAAGGAG
CAGGAGCTTATGGCTCTAGGAACGGTGCAGGAAATTTATGATTATCTGATAGAAAAAGATGAATTTTCAAACTAA

Domains

Predicted by InterProScan.

DHHA1 domain (DHHA1)

(317-434)

DHH family (DHH)

(83-228)

RecJ OB domain (RecJ_OB)

(451-556)

Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C)

(590-734)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recJ Streptococcus pneumoniae strain D39V

76.757

99.462

0.763
  recJ Bacillus subtilis subsp. subtilis str. 168

38.144

100

0.398

Multiple sequence alignment