Detailed information NTG0551042

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: J6M09_RS04710
• Genome accession: NZ_CP072190
• Coordinates: 934868..935971 (-)
• Length: 367 a.a.
• NCBI ID: WP_049334427.1
• Uniprot ID: A0AAP3EVI0
• Organism: Riemerella anatipestifer strain 20190305E2-2
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 929868..940971

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J6M09_RS04685 (J6M09_04695)	comF	931063..931716 (-)	654	WP_153929508.1	ComF family protein	Machinery gene
J6M09_RS04695 (J6M09_04705)	-	931942..932493 (-)	552	WP_153929507.1	hypothetical protein	-
J6M09_RS04700 (J6M09_04710)	-	932547..933197 (-)	651	WP_153929506.1	HD domain-containing protein	-
J6M09_RS04705 (J6M09_04715)	gdhA	933326..934684 (-)	1359	WP_049334426.1	NADP-specific glutamate dehydrogenase	-
J6M09_RS04710 (J6M09_04720)	dprA	934868..935971 (-)	1104	WP_049334427.1	DNA-processing protein DprA	Machinery gene
J6M09_RS04715 (J6M09_04725)	-	935974..936351 (-)	378	WP_049334428.1	group III truncated hemoglobin	-
J6M09_RS04720 (J6M09_04730)	ruvC	936362..936916 (-)	555	WP_064971300.1	crossover junction endodeoxyribonuclease RuvC	-
J6M09_RS04725 (J6M09_04735)	-	936940..938130 (-)	1191	WP_153929505.1	carboxypeptidase-like regulatory domain-containing protein	-
J6M09_RS04730 (J6M09_04740)	-	938159..938632 (-)	474	WP_153926386.1	Lrp/AsnC family transcriptional regulator	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40371.22 Da
• Isoelectric Point: 6.3958

>NTDB_id=551042 J6M09_RS04710 WP_049334427.1 934868..935971(-) (dprA) [Riemerella anatipestifer strain 20190305E2-2]
MVNAEEILYSIALRRSSLVGDVTFANLVGEVGSAKEVWSLSQSELRKISGIGKQIASGIGDESLLKFAEREVEFCIKNEI
KINLRHLNQLPRLLGECYDAPAILFQKGDYDDTANNISIVGTRNATAYGKSFLEDLIVQFKNKNIQVISGLALGTDGIAH
QEALKNNIKTSAVLAHGLHIVYPSKHKILAEEILNNGGALFSEFCSDEKPDREHFLQRNRIVAGLSANTIVVESAYAGGS
ISTASFANQYNREVYALAGRLTDKYSQGCNHLIFQNKAKIISSIKGLLKDLDLDNTSKVLELFPSVEVSLTPIQKPIYDI
IKEVNDISLDDLSEKLNQPISKVLPVLLELELLGLIRANSGRRYSIV

Nucleotide

• Length: 1104 bp

>NTDB_id=551042 J6M09_RS04710 WP_049334427.1 934868..935971(-) (dprA) [Riemerella anatipestifer strain 20190305E2-2]
ATGGTAAATGCAGAAGAAATTTTATACTCTATTGCTTTACGGCGAAGCTCTTTGGTAGGAGATGTTACATTTGCAAATTT
AGTGGGCGAAGTTGGTTCTGCTAAGGAGGTTTGGAGTTTGTCTCAATCGGAGTTAAGAAAAATATCAGGCATAGGTAAAC
AAATTGCCTCAGGTATTGGTGATGAAAGCCTTTTGAAATTTGCCGAAAGGGAAGTTGAGTTCTGCATTAAAAACGAGATA
AAAATCAATCTGAGACATCTTAATCAGCTTCCTCGTCTTTTAGGTGAATGTTATGATGCTCCAGCTATTCTTTTTCAAAA
AGGAGATTATGACGATACCGCTAATAATATTAGCATTGTTGGGACGAGAAATGCCACTGCTTATGGTAAGTCGTTTTTGG
AGGATTTAATTGTTCAGTTTAAAAATAAAAATATTCAAGTCATTAGTGGTTTAGCTTTAGGTACAGACGGAATAGCTCAT
CAAGAGGCTTTAAAAAACAATATAAAAACTTCAGCGGTTTTAGCACACGGTTTACACATTGTTTATCCGTCCAAACATAA
AATTCTCGCTGAAGAAATATTAAATAATGGTGGAGCTTTGTTTTCTGAATTCTGCTCTGATGAAAAGCCAGATAGAGAAC
ATTTTTTGCAAAGAAATCGTATTGTGGCAGGGCTTTCGGCTAATACGATTGTGGTAGAGTCTGCTTATGCAGGAGGTTCT
ATTAGTACAGCGAGTTTTGCTAATCAGTATAATAGAGAGGTGTACGCTTTGGCAGGGCGTCTTACGGATAAGTATAGCCA
AGGTTGCAATCATCTTATTTTTCAAAATAAAGCTAAAATCATATCTTCTATTAAAGGTTTGCTAAAAGACCTAGATTTGG
ATAATACTTCTAAAGTTTTGGAGCTTTTTCCTTCGGTTGAGGTTTCTTTAACTCCTATTCAGAAGCCTATTTATGATATT
ATTAAAGAGGTTAATGATATTTCTTTGGACGACTTGTCAGAAAAGTTAAATCAACCTATTTCTAAAGTGCTTCCAGTTTT
GTTAGAATTAGAATTATTGGGATTGATAAGGGCAAATTCTGGGAGGAGATATTCTATTGTTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

• DprA winged helix domain (DprA_WH) (309-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	94.005	100	0.94