Detailed information NTG0055103

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: ANG_RS05250
• Genome accession: NZ_AP013072
• Coordinates: 1037021..1038133 (+)
• Length: 370 a.a.
• NCBI ID: WP_003024631.1
• Uniprot ID: A0A0P0N8U3
• Organism: Streptococcus anginosus subsp. whileyi MAS624
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 1032021..1043133

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ANG_RS05230 (ANG_1051)	-	1033748..1034086 (+)	339	WP_003024641.1	ATP cone domain-containing protein	-
ANG_RS05235 (ANG_1052)	rpsU	1034284..1034460 (+)	177	WP_000048054.1	30S ribosomal protein S21	-
ANG_RS05240 (ANG_1053)	mscL	1034701..1035081 (-)	381	WP_003031453.1	large conductance mechanosensitive channel protein MscL	-
ANG_RS05245 (ANG_1054)	dnaG	1035237..1037018 (+)	1782	WP_331709746.1	DNA primase	-
ANG_RS05250 (ANG_1055)	rpoS	1037021..1038133 (+)	1113	WP_003024631.1	RNA polymerase sigma factor RpoD	Regulator
ANG_RS05255 (ANG_1056)	-	1038152..1038481 (+)	330	WP_003024629.1	metal-sulfur cluster assembly factor	-
ANG_RS05260 (ANG_1057)	brnQ	1038636..1039964 (+)	1329	WP_003034439.1	branched-chain amino acid transport system II carrier protein	-
ANG_RS05265 (ANG_1058)	ccdA2	1040249..1040959 (+)	711	WP_003024626.1	thiol-disulfide oxidoreductase-associated membrane protein CcdA2	-
ANG_RS05270 (ANG_1059)	-	1041123..1041536 (+)	414	Protein_1019	redoxin domain-containing protein	-
ANG_RS05275 (ANG_1060)	msrB	1041549..1042667 (+)	1119	WP_025271758.1	peptide-methionine (R)-S-oxide reductase MsrB	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42439.09 Da
• Isoelectric Point: 4.4643

>NTDB_id=55103 ANG_RS05250 WP_003024631.1 1037021..1038133(+) (rpoS) [Streptococcus anginosus subsp. whileyi MAS624]
MATKQKEVTTFDVQVAEFIRNHKKTGTATDDEINDRLVIPFTLEADGIEDLLQRIQDAGIAITDKEGNPSERVLNTEEEE
AELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEQELAVLVEQGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLD
LIQEGNMGLMKAVDKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQI
AERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRIVLREQLDEVLDTLTDREENVLRLRF
GLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIED

Nucleotide

• Length: 1113 bp

>NTDB_id=55103 ANG_RS05250 WP_003024631.1 1037021..1038133(+) (rpoS) [Streptococcus anginosus subsp. whileyi MAS624]
ATGGCTACAAAACAAAAAGAAGTAACAACTTTTGATGTTCAAGTTGCAGAATTTATTCGCAACCATAAAAAAACTGGTAC
AGCAACCGATGATGAAATCAATGATCGGCTAGTCATTCCATTTACTTTGGAAGCTGATGGCATTGAAGATCTTCTTCAAC
GGATTCAGGACGCAGGGATTGCTATTACGGATAAAGAGGGCAACCCAAGTGAACGGGTTTTAAATACAGAGGAAGAAGAA
GCTGAATTAACAGATGAGGAGTTGCTTGGTAGCAATTCTGCTAAAGTGAACGACCCTGTCCGTATGTATTTAAAGGAAAT
TGGTGTTGTTCCGTTATTGACCAATGAAGAAGAGCAAGAATTAGCTGTTCTTGTGGAGCAAGGCGACTTAGAAGCGAAAC
AACGTTTGGCAGAAGCGAATTTGCGGTTGGTTGTCTCTATTGCTAAGCGCTATGTTGGACGCGGCATGCAGTTTCTTGAC
TTGATTCAAGAAGGCAATATGGGATTGATGAAAGCCGTTGACAAGTTTGACTATACCAAAGGTTTCAAATTTTCGACCTA
TGCCACTTGGTGGATTCGTCAAGCGATTACTCGTGCGATTGCTGACCAAGCGCGTACGATTCGGATTCCGGTTCACATGG
TTGAGACAATCAATAAATTAGTGCGGGAGCAACGAAATCTTTTGCAAGAATTGGGACAAGATCCAACGCCAGAACAAATT
GCTGAGCGCATGGATATGACACCAGATAAAGTTCGTGAAATTTTGAAGATTGCCCAAGAGCCGGTCTCTCTTGAAACTCC
AATTGGAGAAGAAGATGATAGTCATCTTGGCGATTTCATTGAGGATGAAGTGATTGAAAATCCAGTTGATTACACAACAC
GTATTGTCCTACGTGAGCAATTAGACGAGGTTCTTGATACATTAACAGACCGTGAAGAAAATGTCCTACGTTTGCGTTTC
GGTCTAGATGATGGTAAAATGCGTACGCTGGAAGATGTTGGAAAAGTCTTTAACGTGACTCGTGAACGGATTCGACAAAT
TGAGGCCAAAGCCCTACGCAAATTGCGTCATCCAAGTCGTAGCAAGCCACTTCGTGACTTTATTGAAGATTAG

Domains

Predicted by InterProScan.

• Sigma-70 region 3 (Sigma70_r3) (215-291)

• Sigma-70 region 2 (Sigma70_r2) (136-205)

• Sigma-70, region 4 (Sigma70_r4) (304-357)

• Sigma-70 factor, region 1.1 (Sigma70_r1_1) (14-87)

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (98-130)

3D structure

• AlphaFold DB: A0A0P0N8U3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	46.918	78.919	0.37