Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   LUZ02_RS01000 Genome accession   NZ_CP089491
Coordinates   231570..232193 (+) Length   207 a.a.
NCBI ID   WP_001208757.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 0242_IV_ST30     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 226570..237193
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUZ02_RS00970 - 227544..228011 (-) 468 WP_000966142.1 CcdC family protein -
  LUZ02_RS00975 - 228105..228203 (-) 99 WP_001789897.1 hypothetical protein -
  LUZ02_RS00980 - 228190..228432 (-) 243 WP_000246909.1 YneF family protein -
  LUZ02_RS00985 recP/tkt 228710..230698 (-) 1989 WP_000481444.1 transketolase Machinery gene
  LUZ02_RS00990 - 230819..231058 (-) 240 WP_000071351.1 DUF896 domain-containing protein -
  LUZ02_RS00995 sosA 231194..231427 (-) 234 WP_000499647.1 DNA damage-induced cell division inhibitor SosA -
  LUZ02_RS01000 dinR/lexA 231570..232193 (+) 624 WP_001208757.1 transcriptional repressor LexA Regulator
  LUZ02_RS01005 - 232572..233588 (-) 1017 WP_169274603.1 CAP domain-containing protein -
  LUZ02_RS01010 guaC 233610..234587 (-) 978 WP_000688123.1 GMP reductase -
  LUZ02_RS01015 rpsN 234744..235013 (-) 270 WP_001085655.1 30S ribosomal protein S14 -
  LUZ02_RS01020 rpmG 235467..235616 (-) 150 WP_001265708.1 50S ribosomal protein L33 -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23304.52 Da        Isoelectric Point: 4.8811

>NTDB_id=551007 LUZ02_RS01000 WP_001208757.1 231570..232193(+) (dinR/lexA) [Staphylococcus aureus strain 0242_IV_ST30]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTSDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=551007 LUZ02_RS01000 WP_001208757.1 231570..232193(+) (dinR/lexA) [Staphylococcus aureus strain 0242_IV_ST30]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCGACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAGTGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACC
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTAGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(86-201)

LexA DNA binding domain (LexA_DNA_bind)

(1-65)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657