Detailed information NTG0550998

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: J6M13_RS04155
• Genome accession: NZ_CP072186
• Coordinates: 893964..895067 (-)
• Length: 367 a.a.
• NCBI ID: WP_004918085.1
• Uniprot ID: -
• Organism: Riemerella anatipestifer strain 20190403E1-1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 888964..900067

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J6M13_RS04125 (J6M13_04130)	-	889209..890087 (+)	879	WP_004918508.1	IS982-like element ISRa1 family transposase	-
J6M13_RS04130 (J6M13_04135)	comF	890159..890812 (-)	654	WP_004918078.1	ComF family protein	Machinery gene
J6M13_RS04140 (J6M13_04145)	-	891034..891585 (-)	552	WP_004918080.1	hypothetical protein	-
J6M13_RS04145 (J6M13_04150)	-	891640..892290 (-)	651	WP_004918082.1	HD domain-containing protein	-
J6M13_RS04150 (J6M13_04155)	gdhA	892422..893780 (-)	1359	WP_014938006.1	NADP-specific glutamate dehydrogenase	-
J6M13_RS04155 (J6M13_04160)	dprA	893964..895067 (-)	1104	WP_004918085.1	DNA-processing protein DprA	Machinery gene
J6M13_RS04160 (J6M13_04165)	-	895070..895447 (-)	378	WP_004918086.1	group III truncated hemoglobin	-
J6M13_RS04165 (J6M13_04170)	ruvC	895458..896012 (-)	555	WP_004918088.1	crossover junction endodeoxyribonuclease RuvC	-
J6M13_RS04170 (J6M13_04175)	-	896036..897226 (-)	1191	WP_065189192.1	carboxypeptidase-like regulatory domain-containing protein	-
J6M13_RS04175 (J6M13_04180)	-	897256..897729 (-)	474	WP_004918092.1	Lrp/AsnC family transcriptional regulator	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40491.51 Da
• Isoelectric Point: 6.6968

>NTDB_id=550998 J6M13_RS04155 WP_004918085.1 893964..895067(-) (dprA) [Riemerella anatipestifer strain 20190403E1-1]
MVNAEEILYSIALRRSPLVGDVIFASLVSEVGSAKEAWGLSKLELRKISGVGKQIASNIGDKNLLKFAEKEIEFCIKNEI
KIHLRHLNQLPRLLGECYDAPAILFQKGDYEDTANNISIVGTRNATAYGKSFLEDLIVQFKNKNIQVISGLALGTDGIAH
QEALKNNIKTSAVLAHGLHIIYPSKHKILAEEILNNGGALFSEFCSDEKPDREHFLQRNRIVAGLSANTIVVESAYAGGS
ISTASFANQYNREVYALAGRLTDKYSQGCNHLIFQNKAKIISSIKGLLKDLDLDNTSKVLELFPSVEVSLTPVQEPVYDI
IKEVNDISLDDLSEKLNQPISKVFPVLLELELLGLIRANSGRRYSII

Nucleotide

• Length: 1104 bp

>NTDB_id=550998 J6M13_RS04155 WP_004918085.1 893964..895067(-) (dprA) [Riemerella anatipestifer strain 20190403E1-1]
ATGGTAAATGCGGAAGAAATTTTATATTCTATTGCTCTTCGGCGAAGCCCATTGGTGGGAGATGTTATATTTGCAAGTTT
GGTTAGCGAGGTAGGCTCTGCTAAGGAAGCGTGGGGTCTGTCTAAGTTGGAATTACGGAAAATATCAGGCGTAGGTAAGC
AAATTGCCTCAAACATCGGAGATAAAAATCTTTTAAAATTTGCTGAAAAGGAAATAGAGTTCTGCATTAAAAACGAAATA
AAAATCCACTTACGACATCTTAATCAGCTTCCTCGTCTTTTAGGTGAATGTTATGATGCTCCTGCTATTCTTTTTCAAAA
AGGAGATTATGAGGATACCGCTAATAATATTAGTATTGTTGGGACGAGAAATGCCACTGCTTATGGTAAGTCGTTTTTGG
AGGATTTAATTGTTCAGTTTAAAAATAAAAATATTCAAGTCATTAGTGGTTTAGCTTTAGGTACAGACGGAATAGCTCAT
CAAGAGGCTTTAAAAAACAATATAAAAACTTCAGCGGTTTTAGCACACGGTTTACATATCATTTATCCGTCCAAACATAA
AATTCTCGCTGAAGAAATATTAAATAATGGTGGAGCTTTGTTTTCTGAATTCTGCTCTGATGAAAAGCCAGATAGAGAAC
ATTTTTTGCAAAGAAATCGTATTGTGGCAGGGCTTTCGGCTAATACGATTGTGGTAGAGTCTGCTTATGCAGGAGGCTCT
ATTAGCACGGCGAGTTTTGCTAATCAGTATAATAGAGAAGTGTATGCTTTGGCAGGGCGTCTTACAGATAAATATAGCCA
AGGTTGCAATCATCTTATTTTTCAAAATAAAGCTAAAATCATATCTTCTATTAAAGGTTTGCTAAAAGACCTAGATTTGG
ATAATACTTCTAAAGTTTTGGAGCTTTTTCCTTCAGTTGAAGTTTCTTTAACTCCTGTTCAGGAGCCTGTTTATGATATT
ATTAAGGAGGTTAATGATATTTCATTAGATGACTTGTCAGAAAAATTAAATCAACCCATATCTAAAGTGTTTCCTGTTTT
ATTGGAATTAGAATTATTGGGGTTGATAAGGGCAAATTCTGGGAGGAGATATTCTATCATTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

• DprA winged helix domain (DprA_WH) (309-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	100	100	1