Detailed information NTG0550973

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: J6L78_RS04190
• Genome accession: NZ_CP072185
• Coordinates: 885531..886634 (-)
• Length: 367 a.a.
• NCBI ID: WP_004918085.1
• Uniprot ID: -
• Organism: Riemerella anatipestifer strain 20190109E1-1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 880531..891634

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J6L78_RS04160 (J6L78_04165)	-	881498..881638 (+)	141	WP_015345427.1	hypothetical protein	-
J6L78_RS04165 (J6L78_04170)	comF	881726..882379 (-)	654	WP_004918078.1	ComF family protein	Machinery gene
J6L78_RS04175 (J6L78_04180)	-	882601..883152 (-)	552	WP_004918080.1	hypothetical protein	-
J6L78_RS04180 (J6L78_04185)	-	883207..883857 (-)	651	WP_004918082.1	HD domain-containing protein	-
J6L78_RS04185 (J6L78_04190)	gdhA	883989..885347 (-)	1359	WP_220359278.1	NADP-specific glutamate dehydrogenase	-
J6L78_RS04190 (J6L78_04195)	dprA	885531..886634 (-)	1104	WP_004918085.1	DNA-processing protein DprA	Machinery gene
J6L78_RS04195 (J6L78_04200)	-	886637..887014 (-)	378	WP_004918086.1	group III truncated hemoglobin	-
J6L78_RS04200 (J6L78_04205)	ruvC	887025..887579 (-)	555	WP_004918088.1	crossover junction endodeoxyribonuclease RuvC	-
J6L78_RS04205 (J6L78_04210)	-	887603..888793 (-)	1191	WP_065189192.1	carboxypeptidase-like regulatory domain-containing protein	-
J6L78_RS04210 (J6L78_04215)	-	888823..889296 (-)	474	WP_004918092.1	Lrp/AsnC family transcriptional regulator	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40491.51 Da
• Isoelectric Point: 6.6968

>NTDB_id=550973 J6L78_RS04190 WP_004918085.1 885531..886634(-) (dprA) [Riemerella anatipestifer strain 20190109E1-1]
MVNAEEILYSIALRRSPLVGDVIFASLVSEVGSAKEAWGLSKLELRKISGVGKQIASNIGDKNLLKFAEKEIEFCIKNEI
KIHLRHLNQLPRLLGECYDAPAILFQKGDYEDTANNISIVGTRNATAYGKSFLEDLIVQFKNKNIQVISGLALGTDGIAH
QEALKNNIKTSAVLAHGLHIIYPSKHKILAEEILNNGGALFSEFCSDEKPDREHFLQRNRIVAGLSANTIVVESAYAGGS
ISTASFANQYNREVYALAGRLTDKYSQGCNHLIFQNKAKIISSIKGLLKDLDLDNTSKVLELFPSVEVSLTPVQEPVYDI
IKEVNDISLDDLSEKLNQPISKVFPVLLELELLGLIRANSGRRYSII

Nucleotide

• Length: 1104 bp

>NTDB_id=550973 J6L78_RS04190 WP_004918085.1 885531..886634(-) (dprA) [Riemerella anatipestifer strain 20190109E1-1]
ATGGTAAATGCGGAAGAAATTTTATATTCTATTGCTCTTCGGCGAAGCCCATTGGTGGGAGATGTTATATTTGCAAGTTT
GGTTAGCGAGGTAGGCTCTGCTAAGGAAGCGTGGGGTCTGTCTAAGTTGGAATTACGGAAAATATCAGGCGTAGGTAAGC
AAATTGCCTCAAACATCGGAGATAAAAATCTTTTAAAATTTGCTGAAAAGGAAATAGAGTTCTGCATTAAAAACGAAATA
AAAATCCACTTACGACATCTTAATCAGCTTCCTCGTCTTTTAGGTGAATGTTATGATGCTCCTGCTATTCTTTTTCAAAA
AGGAGATTATGAGGATACCGCTAATAATATTAGTATTGTTGGGACGAGAAATGCCACTGCTTATGGTAAGTCGTTTTTGG
AGGATTTAATTGTTCAGTTTAAAAATAAAAATATTCAAGTCATTAGTGGTTTAGCTTTAGGTACAGACGGAATAGCTCAT
CAAGAGGCTTTAAAAAACAATATAAAAACTTCAGCGGTTTTAGCACACGGTTTACATATCATTTATCCGTCCAAACATAA
AATTCTCGCTGAAGAAATATTAAATAATGGTGGAGCTTTGTTTTCTGAATTCTGCTCTGATGAAAAGCCAGATAGAGAAC
ATTTTTTGCAAAGAAATCGTATTGTGGCAGGGCTTTCGGCTAATACGATTGTGGTAGAGTCTGCTTATGCAGGAGGCTCT
ATTAGCACGGCGAGTTTTGCTAATCAGTATAATAGAGAAGTGTATGCTTTGGCAGGGCGTCTTACAGATAAATATAGCCA
AGGTTGCAATCATCTTATTTTTCAAAATAAAGCTAAAATCATATCTTCTATTAAAGGTTTGCTAAAAGACCTAGATTTGG
ATAATACTTCTAAAGTTTTGGAGCTTTTTCCTTCAGTTGAAGTTTCTTTAACTCCTGTTCAGGAGCCTGTTTATGATATT
ATTAAGGAGGTTAATGATATTTCATTAGATGACTTGTCAGAAAAATTAAATCAACCCATATCTAAAGTGTTTCCTGTTTT
ATTGGAATTAGAATTATTGGGGTTGATAAGGGCAAATTCTGGGAGGAGATATTCTATCATTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

• DprA winged helix domain (DprA_WH) (309-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	100	100	1