Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   LUZ08_RS03905 Genome accession   NZ_CP089489
Coordinates   750742..751365 (+) Length   207 a.a.
NCBI ID   WP_001208760.1    Uniprot ID   Q93SM0
Organism   Staphylococcus aureus strain E1174_IV_ST22     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 745742..756365
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUZ08_RS03875 - 746716..747183 (-) 468 WP_000966142.1 CcdC family protein -
  LUZ08_RS03880 - 747277..747375 (-) 99 WP_001789897.1 hypothetical protein -
  LUZ08_RS03885 - 747362..747604 (-) 243 WP_000246909.1 YneF family protein -
  LUZ08_RS03890 recP/tkt 747882..749870 (-) 1989 WP_000481443.1 transketolase Machinery gene
  LUZ08_RS03895 - 749991..750230 (-) 240 WP_000071351.1 DUF896 domain-containing protein -
  LUZ08_RS03900 sosA 750366..750599 (-) 234 WP_000499647.1 DNA damage-induced cell division inhibitor SosA -
  LUZ08_RS03905 dinR/lexA 750742..751365 (+) 624 WP_001208760.1 transcriptional repressor LexA Regulator
  LUZ08_RS03910 - 751745..752761 (-) 1017 WP_001789887.1 CAP domain-containing protein -
  LUZ08_RS03915 guaC 752783..753760 (-) 978 WP_000688126.1 GMP reductase -
  LUZ08_RS03920 rpsN 753917..754186 (-) 270 WP_001085655.1 30S ribosomal protein S14 -
  LUZ08_RS03925 rpmG 754640..754789 (-) 150 WP_001265708.1 50S ribosomal protein L33 -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23301.46 Da        Isoelectric Point: 4.8811

>NTDB_id=550947 LUZ08_RS03905 WP_001208760.1 750742..751365(+) (dinR/lexA) [Staphylococcus aureus strain E1174_IV_ST22]
MRELTKRQSEIYNYIKQVVQTKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=550947 LUZ08_RS03905 WP_001208760.1 750742..751365(+) (dinR/lexA) [Staphylococcus aureus strain E1174_IV_ST22]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAACGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTAGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q93SM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657