Detailed information    

insolico Bioinformatically predicted

Overview

Name   recR   Type   Machinery gene
Locus tag   ANG_RS03830 Genome accession   NZ_AP013072
Coordinates   742878..743474 (+) Length   198 a.a.
NCBI ID   WP_003031408.1    Uniprot ID   -
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 737878..748474
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS03805 (ANG_0756) - 737948..738781 (+) 834 WP_006269763.1 DegV family protein -
  ANG_RS03810 (ANG_0757) - 738910..739185 (+) 276 WP_003036014.1 HU family DNA-binding protein -
  ANG_RS03815 (ANG_0758) - 739353..739814 (+) 462 WP_003035860.1 Fur family transcriptional regulator -
  ANG_RS03820 (ANG_0759) - 739952..740644 (+) 693 WP_003036126.1 phosphoglycerate mutase -
  ANG_RS03825 (ANG_0760) pbp2b 740801..742867 (+) 2067 WP_020999767.1 penicillin-binding protein PBP2B -
  ANG_RS03830 (ANG_0761) recR 742878..743474 (+) 597 WP_003031408.1 recombination mediator RecR Machinery gene
  ANG_RS03835 (ANG_0762) - 743607..744653 (+) 1047 WP_003035935.1 D-alanine--D-alanine ligase -
  ANG_RS03840 (ANG_0763) - 744785..746155 (+) 1371 WP_025271677.1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase -
  ANG_RS03845 (ANG_0764) - 746145..746696 (+) 552 WP_025271678.1 DUF1697 domain-containing protein -
  ANG_RS03850 (ANG_0765) - 746700..747398 (+) 699 WP_003036069.1 TIGR02206 family membrane protein -
  ANG_RS03855 (ANG_0766) - 747402..748088 (+) 687 WP_020999766.1 TIGR02206 family membrane protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 21650.70 Da        Isoelectric Point: 4.3503

>NTDB_id=55093 ANG_RS03830 WP_003031408.1 742878..743474(+) (recR) [Streptococcus anginosus subsp. whileyi MAS624]
MLYPTPIAKLIDSFSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLAAKRELTYCSICGNLTDDDPCTICTDETRDQS
TILVVEDSRDVSAMENIQEYHGLYHVLQGLISPMNGIGPDDINLKSLITRLMNSEVTEVIVATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL

Nucleotide


Download         Length: 597 bp        

>NTDB_id=55093 ANG_RS03830 WP_003031408.1 742878..743474(+) (recR) [Streptococcus anginosus subsp. whileyi MAS624]
ATGCTTTATCCAACACCGATTGCAAAATTGATTGATAGCTTTTCAAAATTACCAGGAATTGGCATAAAAACAGCAACACG
TTTGGCGTTTTATACCATTGGTATGAGTGATGATGATGTCAATGAATTTGCTAAAAATTTGCTTGCAGCGAAACGTGAGC
TGACCTATTGTTCTATTTGTGGCAATTTAACAGATGATGACCCTTGTACTATCTGCACCGATGAGACACGGGATCAATCT
ACTATTTTGGTTGTAGAAGATAGCCGAGATGTTTCTGCTATGGAAAATATTCAAGAATACCATGGCTTGTACCATGTTTT
GCAGGGATTGATTTCTCCTATGAATGGTATTGGACCAGACGACATCAATCTGAAAAGTCTCATTACACGGTTGATGAATA
GTGAGGTAACAGAGGTAATTGTGGCAACCAATGCGACAGCGGACGGGGAAGCAACTTCCATGTATATCTCACGGGTGTTA
AAACCAGCTGGTATCAAGGTAACGCGCCTGGCTCGTGGATTAGCAGTTGGTTCTGATATTGAATATGCAGACGAAGTGAC
GCTGCTTCGGGCTATTGAGAATCGCACAGAATTGTAA

Domains

Predicted by InterProScan.

Toprim domain (Toprim_4)

(80-171)

RecR protein (RecR_ZnF)

(39-78)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recR Streptococcus pneumoniae R6

91.414

100

0.914
  recR Bacillus subtilis subsp. subtilis str. 168

63.636

100

0.636
  recR Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

48.718

98.485

0.48

Multiple sequence alignment