Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   LUZ08_RS00885 Genome accession   NZ_CP089489
Coordinates   136008..136826 (+) Length   272 a.a.
NCBI ID   WP_001124419.1    Uniprot ID   Q8NVU3
Organism   Staphylococcus aureus strain E1174_IV_ST22     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 131008..141826
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUZ08_RS00850 - 132241..132591 (+) 351 WP_000448198.1 hypothetical protein -
  LUZ08_RS00855 - 132651..132827 (+) 177 WP_001823160.1 hypothetical protein -
  LUZ08_RS00860 - 132824..133279 (+) 456 WP_000971220.1 hypothetical protein -
  LUZ08_RS00865 - 133362..133463 (-) 102 WP_111065334.1 hypothetical protein -
  LUZ08_RS00870 - 133790..133951 (+) 162 WP_001005408.1 SE1561 family protein -
  LUZ08_RS00875 - 134082..134597 (+) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  LUZ08_RS00880 sgtB 134938..135747 (+) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  LUZ08_RS00885 recX 136008..136826 (+) 819 WP_001124419.1 recombination regulator RecX Regulator
  LUZ08_RS00890 - 136804..137118 (+) 315 WP_000435806.1 YfhH family protein -
  LUZ08_RS00895 - 137133..138650 (+) 1518 WP_134944047.1 ABC transporter ATP-binding protein -
  LUZ08_RS00900 - 138659..139495 (+) 837 WP_000886468.1 membrane protein -
  LUZ08_RS00905 - 139756..140733 (-) 978 WP_000379098.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32241.06 Da        Isoelectric Point: 5.9211

>NTDB_id=550917 LUZ08_RS00885 WP_001124419.1 136008..136826(+) (recX) [Staphylococcus aureus strain E1174_IV_ST22]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEIFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=550917 LUZ08_RS00885 WP_001124419.1 136008..136826(+) (recX) [Staphylococcus aureus strain E1174_IV_ST22]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGGTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATTGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATATTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAAGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8NVU3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

100

100

1