Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   LUZ03_RS10490 Genome accession   NZ_CP089487
Coordinates   2092117..2092917 (-) Length   266 a.a.
NCBI ID   WP_000088648.1    Uniprot ID   A0A0H2XG71
Organism   Staphylococcus aureus strain 0220_II_ST5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2087117..2097917
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUZ03_RS10475 - 2087976..2088665 (+) 690 WP_000025820.1 hypothetical protein -
  LUZ03_RS10480 rlmH 2088724..2089203 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  LUZ03_RS10485 adsA 2089571..2091889 (-) 2319 WP_000645780.1 LPXTG-anchored adenosine synthase AdsA -
  LUZ03_RS10490 vicX 2092117..2092917 (-) 801 WP_000088648.1 MBL fold metallo-hydrolase Regulator
  LUZ03_RS10495 - 2093307..2094095 (-) 789 WP_001104172.1 two-component system regulatory protein YycI -
  LUZ03_RS10500 yycH 2094096..2095430 (-) 1335 WP_001060131.1 two-component system activity regulator YycH -
  LUZ03_RS10505 walK 2095423..2097249 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30327.55 Da        Isoelectric Point: 6.3392

>NTDB_id=550898 LUZ03_RS10490 WP_000088648.1 2092117..2092917(-) (vicX) [Staphylococcus aureus strain 0220_II_ST5]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAAHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=550898 LUZ03_RS10490 WP_000088648.1 2092117..2092917(-) (vicX) [Staphylococcus aureus strain 0220_II_ST5]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGAAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGCTCATGCAATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGACAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XG71

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.416

96.617

0.477