Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   LUZ03_RS04060 Genome accession   NZ_CP089487
Coordinates   778182..778805 (+) Length   207 a.a.
NCBI ID   WP_001208760.1    Uniprot ID   Q93SM0
Organism   Staphylococcus aureus strain 0220_II_ST5     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 773182..783805
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUZ03_RS04030 - 774156..774623 (-) 468 WP_000966142.1 CcdC family protein -
  LUZ03_RS04035 - 774717..774815 (-) 99 WP_001789897.1 hypothetical protein -
  LUZ03_RS04040 - 774802..775044 (-) 243 WP_000246909.1 YneF family protein -
  LUZ03_RS04045 recP/tkt 775322..777310 (-) 1989 WP_015581833.1 transketolase Machinery gene
  LUZ03_RS04050 - 777431..777670 (-) 240 WP_000071351.1 DUF896 domain-containing protein -
  LUZ03_RS04055 sosA 777806..778039 (-) 234 WP_000499647.1 DNA damage-induced cell division inhibitor SosA -
  LUZ03_RS04060 dinR/lexA 778182..778805 (+) 624 WP_001208760.1 transcriptional repressor LexA Regulator
  LUZ03_RS04065 - 779185..780201 (-) 1017 WP_001789887.1 CAP domain-containing protein -
  LUZ03_RS04070 guaC 780223..781200 (-) 978 WP_000688126.1 GMP reductase -
  LUZ03_RS04075 rpsN 781357..781626 (-) 270 WP_001085655.1 30S ribosomal protein S14 -
  LUZ03_RS04080 rpmG 782080..782229 (-) 150 WP_001265708.1 50S ribosomal protein L33 -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23301.46 Da        Isoelectric Point: 4.8811

>NTDB_id=550860 LUZ03_RS04060 WP_001208760.1 778182..778805(+) (dinR/lexA) [Staphylococcus aureus strain 0220_II_ST5]
MRELTKRQSEIYNYIKQVVQTKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=550860 LUZ03_RS04060 WP_001208760.1 778182..778805(+) (dinR/lexA) [Staphylococcus aureus strain 0220_II_ST5]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAACGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTAGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q93SM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657