Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   LUY94_RS03725 Genome accession   NZ_CP089485
Coordinates   739302..739925 (+) Length   207 a.a.
NCBI ID   WP_001208760.1    Uniprot ID   Q93SM0
Organism   Staphylococcus aureus strain E1139_IV_ST45     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 734302..744925
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUY94_RS03695 - 735276..735743 (-) 468 WP_000966142.1 CcdC family protein -
  LUY94_RS03700 - 735837..735935 (-) 99 WP_001789897.1 hypothetical protein -
  LUY94_RS03705 - 735922..736164 (-) 243 WP_000246909.1 YneF family protein -
  LUY94_RS03710 recP/tkt 736442..738430 (-) 1989 WP_015581833.1 transketolase Machinery gene
  LUY94_RS03715 - 738551..738790 (-) 240 WP_000071351.1 DUF896 domain-containing protein -
  LUY94_RS03720 sosA 738926..739159 (-) 234 WP_000499647.1 DNA damage-induced cell division inhibitor SosA -
  LUY94_RS03725 dinR/lexA 739302..739925 (+) 624 WP_001208760.1 transcriptional repressor LexA Regulator
  LUY94_RS03730 - 740305..741321 (-) 1017 WP_001789887.1 CAP domain-containing protein -
  LUY94_RS03735 guaC 741343..742320 (-) 978 WP_000688126.1 GMP reductase -
  LUY94_RS03740 rpsN 742477..742746 (-) 270 WP_001085655.1 30S ribosomal protein S14 -
  LUY94_RS03745 rpmG 743200..743349 (-) 150 WP_001265708.1 50S ribosomal protein L33 -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23301.46 Da        Isoelectric Point: 4.8811

>NTDB_id=550774 LUY94_RS03725 WP_001208760.1 739302..739925(+) (dinR/lexA) [Staphylococcus aureus strain E1139_IV_ST45]
MRELTKRQSEIYNYIKQVVQTKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=550774 LUY94_RS03725 WP_001208760.1 739302..739925(+) (dinR/lexA) [Staphylococcus aureus strain E1139_IV_ST45]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAACGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTAGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q93SM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657