Detailed information    

insolico Bioinformatically predicted

Overview


Name   uvrA   Type   Machinery gene
Locus tag   ANG_RS02435 Genome accession   NZ_AP013072
Coordinates   461055..463880 (+) Length   941 a.a.
NCBI ID   WP_003037804.1    Uniprot ID   I0SA28
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 456055..468880
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS02405 (ANG_0472) - 456725..457768 (-) 1044 WP_025271617.1 bifunctional glycosyltransferase family 2/GtrA family protein -
  ANG_RS02410 (ANG_0473) rpsF 458045..458335 (+) 291 WP_003026325.1 30S ribosomal protein S6 -
  ANG_RS02415 (ANG_0474) ssb 458348..458839 (+) 492 WP_003026323.1 single-stranded DNA-binding protein Machinery gene
  ANG_RS02420 (ANG_0475) rpsR 458876..459115 (+) 240 WP_000068664.1 30S ribosomal protein S18 -
  ANG_RS02425 (ANG_0476) - 459295..459972 (-) 678 WP_003037754.1 DUF1129 domain-containing protein -
  ANG_RS02430 (ANG_0477) - 459988..460932 (-) 945 WP_003030529.1 magnesium transporter CorA family protein -
  ANG_RS02435 (ANG_0478) uvrA 461055..463880 (+) 2826 WP_003037804.1 excinuclease ABC subunit UvrA Machinery gene
  ANG_RS02440 (ANG_0479) - 463918..464673 (-) 756 WP_020999818.1 hypothetical protein -
  ANG_RS02445 (ANG_0480) - 464832..465893 (+) 1062 WP_025271618.1 M24 family metallopeptidase -
  ANG_RS02450 (ANG_0481) efp 465952..466512 (+) 561 WP_003037772.1 elongation factor P -
  ANG_RS02455 (ANG_0482) - 466623..467012 (+) 390 WP_003037725.1 Asp23/Gls24 family envelope stress response protein -
  ANG_RS02460 (ANG_0483) nusB 467005..467430 (+) 426 WP_003037723.1 transcription antitermination factor NusB -
  ANG_RS02465 (ANG_0484) comR/comR2 467647..468120 (+) 474 WP_020999816.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence


Protein


Download         Length: 941 a.a.        Molecular weight: 103840.14 Da        Isoelectric Point: 6.4507

>NTDB_id=55075 ANG_RS02435 WP_003037804.1 461055..463880(+) (uvrA) [Streptococcus anginosus subsp. whileyi MAS624]
MQDKIIIHGARAHNLKNIDVTIPRDKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGNMEKPDVDSIDGL
SPAISIDQKTTSKNPRSTVGTATEINDYLRLLYARVGTPYCINGHGAITASAVEQIVNQVLELPERQRLQILAPVIRKKK
GQHKTIFEKIQKDGYVRVRADGDVYDVTEVPDLSKTKKHDIEVVVDRIVIKDGVRSRLFDSIEAALRIADGYVVIDTMDG
KELLFSEHYACPVCGFTVPELEPRLFSFNAPFGSCPDCDGLGVKLEVDLDMVVPDSSKTLREGALAPWNPISSNYYPQML
EQAMTEFGIDMDKPFEDLTEDERQLIFFGSEGREFHFHYENEFGGVRDIDIPFEGVVTNINRRYHETNSDFTRTQMRLYM
NELTCASCHGYRLNPQALSVKVGGEGGLNIGQVSDLSIADHLELISHLTLTENEVAIATPIIKEIRDRLTFLHNVGLNYL
TLSRSAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNNRLIASLKKMRDLGNTLIVVEHDEDTMREADWLI
DVGPGAGVFGGEIVAAGTPDQVAKNKKSITGQYLSGKREIPLPLERRVGNGLFIEVTGAREHNLQNITARFPLGKFIAVT
GVSGSGKSTLVNSILKKAIAQKLNRNSDKPGKFKKISGIEHIDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAKTNE
AKIHGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGTRYNSETLEVHYKDKNIAQVLDMTVNDAVEFF
KHIPKIERKLQTIKDVGLGYVTLGQPATTLSGGEAQRMKLASELHKRSTGKSFYILDEPTTGLHTEDIAKLLQVLSRFVD
DGNTVLVIEHNLDVIKTADHIIDLGPEGGIGGGTIIATGTPEEVAANSASYTGQYLKGKLK

Nucleotide


Download         Length: 2826 bp        

>NTDB_id=55075 ANG_RS02435 WP_003037804.1 461055..463880(+) (uvrA) [Streptococcus anginosus subsp. whileyi MAS624]
ATGCAGGATAAAATTATCATTCATGGAGCGCGAGCTCATAATCTAAAAAATATTGATGTCACGATTCCGCGGGACAAACT
GGTTGTCGTGACTGGTTTGTCTGGTTCGGGAAAGTCTAGCCTCGCTTTTGACACTCTCTATGCAGAAGGACAACGGCGCT
ATGTAGAAAGTTTGTCTGCCTATGCCCGTCAATTTTTGGGCAATATGGAAAAACCAGATGTGGATTCAATTGACGGACTT
AGTCCAGCTATTTCTATTGACCAAAAAACGACCAGCAAGAATCCACGGTCAACGGTTGGAACAGCAACAGAAATCAACGA
TTACCTTCGTTTGCTCTATGCGCGTGTGGGTACTCCTTACTGTATCAATGGGCATGGAGCTATTACTGCTTCTGCTGTGG
AACAAATCGTCAATCAAGTTTTGGAATTACCCGAACGTCAGCGATTACAAATTCTAGCGCCAGTTATCCGTAAGAAAAAA
GGACAGCACAAGACAATCTTTGAAAAAATCCAAAAAGATGGGTATGTGCGAGTGCGCGCGGACGGGGACGTTTATGATGT
AACCGAAGTCCCAGATCTTTCTAAAACGAAAAAGCACGATATCGAAGTAGTGGTGGACCGAATTGTTATTAAGGACGGTG
TACGCAGTCGGTTGTTTGATTCGATTGAAGCAGCCTTAAGAATTGCGGACGGTTACGTGGTGATCGATACGATGGATGGC
AAGGAATTACTCTTTTCCGAGCATTATGCTTGTCCAGTCTGTGGCTTTACGGTACCTGAGTTGGAGCCTCGCCTCTTTTC
TTTTAATGCACCATTCGGCTCTTGTCCTGATTGTGACGGTCTGGGTGTGAAGTTGGAAGTGGACTTGGATATGGTGGTTC
CTGACAGTAGTAAAACCTTGCGGGAAGGCGCCTTAGCTCCGTGGAATCCTATTTCTTCAAATTACTATCCTCAAATGCTA
GAGCAGGCAATGACGGAATTTGGTATTGATATGGATAAGCCATTTGAGGACCTGACAGAAGACGAGCGGCAGCTGATTTT
CTTTGGCTCTGAAGGACGAGAATTTCATTTCCATTATGAAAATGAATTTGGTGGTGTGCGAGATATTGACATTCCTTTTG
AAGGCGTCGTGACCAATATCAACCGTCGCTACCATGAGACCAATAGTGATTTCACCCGTACCCAGATGCGGCTTTATATG
AATGAGTTGACTTGTGCGAGTTGCCATGGTTATCGATTGAATCCACAAGCCTTGTCTGTTAAAGTGGGGGGTGAAGGTGG
TCTTAATATTGGCCAAGTATCTGATTTGTCTATTGCAGATCATTTAGAATTGATTTCTCATCTGACATTGACTGAAAACG
AAGTGGCCATTGCAACACCGATTATTAAAGAAATTCGCGATCGCTTGACTTTTCTTCATAATGTCGGACTTAATTATCTA
ACTCTGTCTCGGTCTGCGGGAACATTGTCGGGTGGGGAGAGTCAGCGGATCCGCTTGGCGACTCAAATCGGCTCTAATCT
CAGCGGTGTTCTTTATATCTTAGATGAGCCTTCTATCGGTCTTCATCAGCGGGATAACAATCGCTTGATTGCCAGTCTCA
AAAAAATGCGTGATTTGGGTAATACCCTCATTGTGGTTGAACATGATGAGGACACCATGCGTGAAGCGGATTGGTTAATT
GATGTTGGACCGGGAGCTGGTGTTTTCGGTGGCGAAATTGTTGCGGCAGGCACACCTGATCAAGTTGCAAAAAACAAGAA
ATCAATTACAGGTCAGTATTTATCGGGCAAACGTGAAATTCCACTGCCATTGGAGCGCCGCGTAGGAAACGGCCTCTTTA
TTGAAGTAACAGGTGCGCGAGAGCACAATTTGCAAAATATCACAGCTCGTTTCCCTCTAGGAAAATTCATTGCTGTGACA
GGTGTTTCTGGTTCCGGAAAGTCTACTCTGGTTAATTCTATTCTCAAAAAAGCAATCGCTCAAAAACTCAATCGTAATTC
AGACAAACCGGGAAAATTTAAAAAGATTTCAGGCATTGAGCATATCGATCGTTTGATTGATATTGACCAGAGCCCGATTG
GACGGACTCCTCGCTCCAATCCTGCCACCTATACTGGGGTTTTCGATGATATTCGTGATCTCTTTGCTAAAACCAACGAA
GCTAAGATTCATGGGTATAAAAAAGGGCGTTTCTCTTTCAATGTGAAGGGGGGGCGCTGCGAGGCCTGCTCTGGGGATGG
GATTATCAAGATTGAGATGCATTTTCTACCAGATGTCTACGTTCCTTGTGAAGTTTGCCACGGCACTCGCTACAATAGTG
AAACTCTGGAAGTGCATTATAAGGATAAGAATATCGCACAAGTTTTGGATATGACGGTCAATGATGCAGTGGAATTTTTT
AAGCATATTCCTAAAATTGAGCGGAAACTTCAGACCATCAAAGACGTAGGACTAGGATATGTAACGTTAGGACAACCTGC
CACAACTCTGTCTGGTGGGGAGGCGCAGCGGATGAAACTAGCCAGCGAACTTCACAAGCGCTCAACAGGTAAGTCTTTCT
ATATTCTGGATGAACCAACTACAGGTCTGCACACGGAGGATATTGCGAAACTTCTCCAAGTGCTATCACGTTTTGTAGAT
GATGGCAACACGGTTCTCGTCATCGAGCATAATTTGGACGTTATTAAGACGGCTGATCACATTATTGACCTTGGGCCAGA
AGGTGGTATTGGTGGAGGTACTATTATTGCAACTGGTACACCGGAAGAAGTAGCTGCAAACTCTGCTAGCTATACTGGCC
AGTATCTAAAAGGAAAGTTAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I0SA28

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  uvrA Streptococcus pneumoniae R6

89.362

99.894

0.893

  uvrA Streptococcus pneumoniae TIGR4

89.362

99.894

0.893

  uvrA Streptococcus pneumoniae D39

89.362

99.894

0.893


Multiple sequence alignment