Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   LUZ05_RS14120 Genome accession   NZ_CP089481
Coordinates   2810027..2810497 (-) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain E1038_IIV_ST8     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2805027..2815497
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUZ05_RS14090 - 2805067..2805480 (+) 414 WP_001123303.1 DUF393 domain-containing protein -
  LUZ05_RS14095 - 2805680..2806123 (+) 444 WP_000070866.1 Dps family protein -
  LUZ05_RS14100 deoD 2806244..2806954 (-) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  LUZ05_RS14105 deoC 2807269..2807931 (+) 663 WP_001083311.1 deoxyribose-phosphate aldolase -
  LUZ05_RS14110 - 2808210..2809511 (+) 1302 WP_001242318.1 pyrimidine-nucleoside phosphorylase -
  LUZ05_RS14115 - 2809525..2809875 (+) 351 WP_001024035.1 membrane protein -
  LUZ05_RS14120 luxS 2810027..2810497 (-) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  LUZ05_RS14125 - 2810808..2811992 (+) 1185 WP_001291500.1 M20 family metallopeptidase -
  LUZ05_RS14130 - 2811992..2813185 (+) 1194 WP_000183726.1 hypothetical protein -
  LUZ05_RS14135 - 2813584..2814255 (+) 672 WP_000120549.1 DUF2750 domain-containing protein -
  LUZ05_RS14140 coaW 2814385..2815188 (-) 804 WP_000862727.1 type II pantothenate kinase -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=550650 LUZ05_RS14120 WP_000164421.1 2810027..2810497(-) (luxS) [Staphylococcus aureus strain E1038_IIV_ST8]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=550650 LUZ05_RS14120 WP_000164421.1 2810027..2810497(-) (luxS) [Staphylococcus aureus strain E1038_IIV_ST8]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAGGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCCG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404