Detailed information    

insolico Bioinformatically predicted

Overview


Name   hexA   Type   Machinery gene
Locus tag   ANG_RS01115 Genome accession   NZ_AP013072
Coordinates   212234..214795 (+) Length   853 a.a.
NCBI ID   WP_020999883.1    Uniprot ID   -
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context


Location: 207234..219795
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS01095 (ANG_0196) - 208536..209045 (+) 510 WP_003027812.1 hypothetical protein -
  ANG_RS01100 (ANG_0197) nrdI 209121..209576 (+) 456 WP_020999884.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  ANG_RS01105 (ANG_0198) argS 209631..211319 (-) 1689 WP_003038336.1 arginine--tRNA ligase -
  ANG_RS01110 (ANG_0199) argR 211423..211863 (+) 441 WP_003038414.1 arginine repressor -
  ANG_RS01115 (ANG_0200) hexA 212234..214795 (+) 2562 WP_020999883.1 DNA mismatch repair protein MutS Machinery gene
  ANG_RS01120 (ANG_0201) - 214983..215441 (-) 459 WP_003038399.1 DUF3021 domain-containing protein -
  ANG_RS01125 (ANG_0202) - 215438..215878 (-) 441 WP_003032335.1 LytTR family DNA-binding domain-containing protein -
  ANG_RS01130 (ANG_0203) - 216430..216810 (-) 381 WP_003038371.1 type II toxin-antitoxin system HicB family antitoxin -
  ANG_RS01135 (ANG_0204) - 216846..217037 (-) 192 WP_003038349.1 type II toxin-antitoxin system HicA family toxin -
  ANG_RS11270 - 217173..217286 (-) 114 Protein_201 phage terminase small subunit P27 family -
  ANG_RS01140 (ANG_0205) - 217568..218008 (-) 441 WP_003038422.1 ArpU family phage packaging/lysis transcriptional regulator -
  ANG_RS01145 (ANG_0206) - 218257..219108 (-) 852 WP_020999881.1 ATP-binding protein -

Sequence


Protein


Download         Length: 853 a.a.        Molecular weight: 96034.63 Da        Isoelectric Point: 5.0002

>NTDB_id=55062 ANG_RS01115 WP_020999883.1 212234..214795(+) (hexA) [Streptococcus anginosus subsp. whileyi MAS624]
MTKEKLSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYDDATNAAQILEIALTSRNKNSENPIPMAGVPYHSVQQYIDVLI
EAGYKVAIAEQMEDPKKAVGVVKREVVQVITPGTVVDSSKPDSQNNFLVALDKLSGIYGLAYMDVGTGEFQVTSLSDFNI
VCGEIRNLRAREVVLGYELPEMERQVLETQMTLLLSQVETTFDDVQLLGKDLSPLEHQVAGKLLQYVHKTQLRELSHLKQ
VHHYEIKDFLQMDYSTMASLDLTENARTGKKHGSLYWLMDDTKTAMGTRLLRAWIQRPLIDKERIVKRQDVVQVFLDHFF
ERSDLSDTLKGVYDIERLASRVSFGKTNPKDLLQLAATLSHVPQIKGILKGIDSPVLEDLIAKLDEIPELASLIQSAISP
DAPNVITEGNIIKTGFDETLDKYRVVMRDGTSWIADIEAKEREASGINNLKIDYNKKDGYYFHVTNSQLEHVPSHFFRKA
TLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMRIREEAGKYIKRLQSLAQTLATVDVLQSFAAVAEKQHFVRPEFI
EQRSIQIDKGRHAVVEKVMGAQTYIPNSISMDENVNVQLITGPNMSGKSTYMRQLAIIVIMAQMGSYVSAESAQLPIFDA
IFTRIGAADDLVSGQSTFMIEMMEANHAISQATENSLILFDELGRGTATYDGMALAQAIIEYIHNRTGAKTLFATHYHEL
TELSTSLTQLENVHVETLEKDGQVTFLHKIEVGPADKSYGIHVAKIAGLPNDLLTRADQILTRLESQANEKSSFGISNTL
PTDAREKNQVAEQMSLFTETTESPILDELRQLDIYNMTPMEVMLAVAEIKKKL

Nucleotide


Download         Length: 2562 bp        

>NTDB_id=55062 ANG_RS01115 WP_020999883.1 212234..214795(+) (hexA) [Streptococcus anginosus subsp. whileyi MAS624]
ATGACAAAAGAAAAACTATCTCCAGGAATGCAACAGTATTTAGATATAAAAAAAGATTATCCAGATGCTTTTTTGTTGTT
TCGCATGGGAGATTTTTATGAATTATTCTATGATGATGCGACCAATGCGGCACAGATTTTAGAGATTGCTCTGACTAGTC
GCAATAAAAACTCGGAAAATCCAATCCCAATGGCAGGAGTTCCTTACCATTCAGTGCAGCAATACATTGATGTTTTAATT
GAAGCAGGCTATAAAGTTGCGATTGCAGAGCAAATGGAAGATCCTAAAAAAGCGGTTGGAGTAGTCAAACGCGAAGTAGT
ACAGGTGATTACGCCGGGGACAGTAGTTGATTCTTCAAAACCAGACAGTCAGAATAACTTTTTAGTGGCTTTGGATAAGC
TGTCAGGTATATATGGACTGGCTTATATGGATGTGGGAACGGGTGAATTTCAGGTCACAAGTCTTAGTGACTTTAACATA
GTCTGTGGAGAAATCCGAAACTTGCGAGCTCGTGAAGTGGTCTTAGGGTATGAATTGCCTGAAATGGAGCGCCAAGTATT
GGAGACTCAAATGACTCTCCTTTTATCGCAAGTAGAAACTACATTTGATGATGTTCAGCTACTAGGAAAGGACTTGTCAC
CGCTAGAGCACCAAGTAGCTGGAAAGTTATTACAGTATGTTCATAAAACGCAGCTACGTGAGCTTAGTCATTTGAAACAA
GTTCATCATTATGAAATCAAAGATTTCTTGCAGATGGACTACTCAACTATGGCAAGTCTGGATTTAACAGAGAATGCTCG
GACAGGAAAGAAGCACGGGAGCCTTTATTGGCTGATGGATGATACCAAGACAGCTATGGGAACACGATTGTTGAGAGCGT
GGATTCAACGTCCGTTGATTGATAAAGAGCGAATCGTCAAGCGGCAGGATGTAGTGCAAGTCTTTTTAGATCATTTCTTT
GAGCGCAGTGACTTATCAGACACTCTCAAAGGAGTGTATGATATTGAGCGTTTAGCCAGTCGGGTTTCGTTTGGCAAGAC
CAATCCAAAAGATTTATTACAACTTGCTGCGACATTGAGTCATGTACCACAAATTAAGGGAATCTTAAAAGGAATTGACA
GCCCAGTTTTGGAAGATTTGATTGCCAAATTGGATGAAATTCCTGAACTGGCGTCCTTAATTCAGTCAGCAATTTCGCCG
GATGCTCCAAATGTCATTACAGAGGGTAATATTATTAAAACAGGTTTTGATGAAACCTTGGATAAATATCGAGTGGTTAT
GCGAGATGGAACGAGCTGGATTGCAGATATTGAGGCGAAAGAAAGAGAAGCTAGTGGAATTAACAACCTGAAGATTGATT
ACAATAAAAAAGATGGTTATTATTTCCATGTCACCAATTCTCAGCTTGAGCATGTTCCCAGTCATTTTTTCCGCAAGGCA
ACTTTGAAAAATTCGGAGCGTTTTGGTACGGAAGAACTGGCTCGTATTGAAGGTGAGATGTTGGAAGCGCGTGAAAAATC
AGCTAATTTGGAATACGAGATTTTTATGCGCATTCGTGAGGAAGCTGGTAAATATATCAAACGCCTGCAATCCTTGGCGC
AAACTCTGGCAACGGTTGATGTGCTGCAAAGCTTTGCAGCTGTAGCAGAAAAGCAACATTTTGTGAGACCAGAATTTATT
GAGCAGCGCTCTATCCAAATTGATAAAGGGCGGCATGCGGTCGTAGAAAAAGTTATGGGTGCACAAACCTACATTCCTAA
TAGCATTTCAATGGATGAGAATGTTAATGTTCAGCTAATTACAGGCCCAAATATGAGTGGGAAGTCAACTTATATGCGGC
AGTTAGCGATTATTGTGATTATGGCTCAAATGGGCTCTTATGTTTCAGCCGAAAGTGCCCAATTGCCGATTTTTGATGCA
ATCTTTACTCGAATTGGTGCAGCTGATGACTTGGTTTCTGGACAATCAACCTTTATGATTGAAATGATGGAAGCGAACCA
TGCTATTTCTCAAGCAACAGAAAATTCACTCATTCTTTTTGATGAGTTAGGAAGAGGAACAGCTACCTATGATGGCATGG
CGCTTGCTCAAGCTATTATTGAGTATATTCACAATCGGACAGGAGCCAAGACACTTTTTGCGACTCACTATCACGAGTTG
ACAGAACTGTCAACTAGCTTGACACAACTAGAAAATGTCCATGTAGAAACCCTAGAAAAAGATGGTCAAGTAACATTTCT
TCATAAGATTGAGGTTGGACCTGCTGATAAATCTTATGGGATTCATGTAGCAAAAATTGCAGGTTTGCCAAATGATTTGT
TGACAAGAGCGGATCAAATATTGACACGATTAGAAAGCCAAGCAAATGAGAAGTCATCTTTTGGCATCTCTAATACATTG
CCTACGGATGCTCGTGAAAAAAATCAAGTGGCTGAGCAGATGTCTTTATTTACAGAAACAACTGAATCACCTATTTTAGA
CGAGTTGCGCCAGTTGGACATTTATAATATGACCCCAATGGAAGTGATGTTGGCTGTGGCAGAGATAAAGAAGAAACTTT
AA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hexA Streptococcus pneumoniae R6

76.202

100

0.762

  mutS Pseudomonas stutzeri strain ATCC 17587

36.269

100

0.367


Multiple sequence alignment