Detailed information    

insolico Bioinformatically predicted

Overview


Name   recA   Type   Machinery gene
Locus tag   J5M87_RS09430 Genome accession   NZ_CP072115
Coordinates   2016036..2017202 (-) Length   388 a.a.
NCBI ID   WP_154607601.1    Uniprot ID   A0A6I4RA69
Organism   Streptococcus zhangguiae strain zg-86     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2011036..2022202
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J5M87_RS09400 (J5M87_09400) - 2011117..2012364 (-) 1248 WP_154607596.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  J5M87_RS09405 (J5M87_09405) - 2012867..2013796 (-) 930 WP_154607597.1 XRE family transcriptional regulator -
  J5M87_RS09410 (J5M87_09410) - 2014180..2014491 (-) 312 WP_154607598.1 DUF1292 domain-containing protein -
  J5M87_RS09415 (J5M87_09415) ruvX 2014502..2014921 (-) 420 WP_154607599.1 Holliday junction resolvase RuvX -
  J5M87_RS09420 (J5M87_09420) - 2014921..2015187 (-) 267 WP_075099514.1 IreB family regulatory phosphoprotein -
  J5M87_RS09425 (J5M87_09425) spx 2015362..2015760 (-) 399 WP_154607600.1 transcriptional regulator Spx -
  J5M87_RS09430 (J5M87_09430) recA 2016036..2017202 (-) 1167 WP_154607601.1 recombinase RecA Machinery gene
  J5M87_RS09435 (J5M87_09435) cinA 2017237..2018439 (-) 1203 WP_154607602.1 competence/damage-inducible protein A Machinery gene
  J5M87_RS09440 (J5M87_09440) - 2018513..2019184 (-) 672 WP_154607603.1 CPBP family intramembrane glutamic endopeptidase -
  J5M87_RS09445 (J5M87_09445) - 2019157..2019558 (-) 402 WP_202120285.1 helix-turn-helix transcriptional regulator -
  J5M87_RS09450 (J5M87_09450) - 2019645..2020232 (-) 588 WP_154607604.1 GNAT family N-acetyltransferase -
  J5M87_RS09455 (J5M87_09455) - 2020225..2020791 (-) 567 WP_154607605.1 DNA-3-methyladenine glycosylase I -
  J5M87_RS09460 (J5M87_09460) ruvA 2020803..2021393 (-) 591 WP_154607606.1 Holliday junction branch migration protein RuvA -

Sequence


Protein


Download         Length: 388 a.a.        Molecular weight: 41637.44 Da        Isoelectric Point: 5.0595

>NTDB_id=550559 J5M87_RS09430 WP_154607601.1 2016036..2017202(-) (recA) [Streptococcus zhangguiae strain zg-86]
MAKKPSKKLEDITKKFGDERKKALDDALKTIEKDFGKGAIMRLGERAEQKVQVMSSGSLSIDIALGAGGYPKGRIIEIYG
PESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAQALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSV
AALVPRAEIDGEIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRMDVR
GNTQIKGSGDQKDTNVGKETKVKIVKNKVAPPFKEAVVEIMYGHGISQTGELIEIGSNLGIIKKAGAWYSYNDEKIGQGS
ENAKKYLEENPEIFAEIDRKIRVHYGLIEDSGETEVVEATAKVGEKKDAVAEVQDVVLDLDGGIELED

Nucleotide


Download         Length: 1167 bp        

>NTDB_id=550559 J5M87_RS09430 WP_154607601.1 2016036..2017202(-) (recA) [Streptococcus zhangguiae strain zg-86]
TTGGCGAAAAAACCAAGTAAAAAATTAGAAGATATTACCAAAAAATTTGGTGATGAACGCAAAAAAGCCTTAGATGATGC
CCTTAAGACCATTGAAAAAGACTTTGGTAAGGGTGCTATCATGCGATTGGGAGAGCGCGCTGAACAAAAAGTTCAAGTCA
TGAGTTCAGGAAGTCTATCGATTGATATTGCTTTGGGGGCTGGTGGTTATCCGAAAGGACGGATTATTGAAATTTATGGT
CCTGAAAGCTCTGGTAAGACGACGGTAGCCCTTCATGCAGTTGCTCAAGCGCAAAAAGAAGGTGGTATTGCAGCCTTTAT
CGATGCTGAGCATGCCCTTGATCCAGCCTATGCCCAAGCACTAGGCGTTAACATCGATGAGTTGCTCTTATCACAACCAG
ACTCTGGTGAACAGGGACTTGAAATTGCAGGGAAGTTGATTGATTCAGGTGCAGTTGACCTAGTGGTAGTCGATTCGGTT
GCAGCCCTTGTTCCTCGTGCTGAGATTGACGGTGAAATTGGAGATAGCCACGTTGGTTTGCAAGCTCGAATGATGAGTCA
GGCGATGCGGAAACTATCTGCTTCAATTAACAAGACCAAAACTATTGCCATTTTTATCAACCAATTGCGTGAAAAAGTTG
GTGTGATGTTTGGAAATCCTGAAACAACGCCTGGTGGACGTGCGCTGAAATTCTACGCATCTGTCCGTATGGATGTTCGT
GGAAATACCCAGATTAAGGGTAGTGGTGACCAAAAAGATACCAATGTCGGAAAAGAGACCAAGGTTAAAATCGTTAAAAA
CAAGGTTGCTCCTCCTTTCAAGGAAGCAGTTGTTGAAATCATGTATGGTCACGGTATCTCACAGACTGGTGAATTAATTG
AAATCGGAAGTAATCTTGGTATTATCAAAAAAGCAGGTGCTTGGTATTCGTATAATGATGAGAAAATCGGACAAGGTTCA
GAAAATGCCAAGAAATATTTGGAAGAGAATCCAGAAATTTTTGCAGAAATCGACCGAAAAATTCGTGTACACTATGGCTT
GATTGAAGATTCAGGAGAAACAGAAGTAGTAGAGGCTACAGCAAAAGTCGGAGAGAAAAAAGATGCTGTCGCAGAAGTCC
AAGATGTCGTTCTTGATTTAGATGGTGGCATTGAATTGGAAGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6I4RA69

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus mitis SK321

83.632

100

0.843

  recA Streptococcus mitis NCTC 12261

83.376

100

0.84

  recA Streptococcus pneumoniae TIGR4

83.721

99.742

0.835

  recA Streptococcus pneumoniae Rx1

83.721

99.742

0.835

  recA Streptococcus pneumoniae D39

83.721

99.742

0.835

  recA Streptococcus pneumoniae R6

83.721

99.742

0.835

  recA Streptococcus mutans UA159

83.033

100

0.832

  recA Streptococcus pyogenes NZ131

82.216

100

0.822

  recA Lactococcus lactis subsp. cremoris KW2

76.705

90.722

0.696

  recA Bacillus subtilis subsp. subtilis str. 168

68.389

84.794

0.58

  recA Latilactobacillus sakei subsp. sakei 23K

67.576

85.052

0.575

  recA Glaesserella parasuis strain SC1401

57.66

92.526

0.534

  recA Neisseria gonorrhoeae MS11

60.174

88.66

0.534

  recA Neisseria gonorrhoeae strain FA1090

60.174

88.66

0.534

  recA Neisseria gonorrhoeae MS11

60.174

88.66

0.534

  recA Acinetobacter baumannii D1279779

63.19

84.021

0.531

  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

60.117

87.887

0.528

  recA Vibrio cholerae strain A1552

62.769

83.763

0.526

  recA Vibrio cholerae O1 biovar El Tor strain E7946

62.769

83.763

0.526

  recA Acinetobacter baylyi ADP1

62.154

83.763

0.521

  recA Pseudomonas stutzeri DSM 10701

60.615

83.763

0.508

  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

59.878

84.794

0.508

  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

58.308

85.309

0.497

  recA Ralstonia pseudosolanacearum GMI1000

60.568

81.701

0.495

  recA Helicobacter pylori strain NCTC11637

57.273

85.052

0.487

  recA Helicobacter pylori 26695

57.273

85.052

0.487