Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   ANG_RS00445 Genome accession   NZ_AP013072
Coordinates   91793..92566 (-) Length   257 a.a.
NCBI ID   WP_025271540.1    Uniprot ID   -
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 86793..97566
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS00430 (ANG_0085) purC 89690..90397 (-) 708 WP_025271537.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -
  ANG_RS00435 (ANG_0086) - 90556..90801 (-) 246 WP_025271538.1 acyl carrier protein -
  ANG_RS00440 (ANG_0087) plsX 90798..91796 (-) 999 WP_025271539.1 phosphate acyltransferase PlsX -
  ANG_RS00445 (ANG_0088) recO 91793..92566 (-) 774 WP_025271540.1 DNA repair protein RecO Machinery gene
  ANG_RS00450 (ANG_0089) - 92544..93731 (-) 1188 WP_025271541.1 pyridoxal phosphate-dependent aminotransferase -
  ANG_RS00455 (ANG_0090) - 93886..94854 (-) 969 WP_025271542.1 ribose-phosphate diphosphokinase -
  ANG_RS00460 (ANG_0091) pcsB 94987..96216 (-) 1230 WP_025271543.1 peptidoglycan hydrolase PcsB -
  ANG_RS00465 (ANG_0092) mreD 96326..96826 (-) 501 WP_025271544.1 rod shape-determining protein MreD -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29907.34 Da        Isoelectric Point: 5.8562

>NTDB_id=55055 ANG_RS00445 WP_025271540.1 91793..92566(-) (recO) [Streptococcus anginosus subsp. whileyi MAS624]
MLKSITSKGLVLYNRNFRENDKLVKIFTEQAGKRMFFVKHARNSKLNPVIQPLVVADFLMKINDDGLSYIDDYQEVTTFQ
HINHDLFAMAYATYVVALADASIQDNEIDSALFAFLQKTLELMEQGLDYEVLTNIFEIQILSRFGVSLNFHECCFCHRVG
LPFDFSFTYNGVLCPEHYGKDERRSHLDPNIPYLLDQFQAVQFSELETISLKPELKRQLRKVIDQIYEEYVGIHLKPKKF
IDSLGDWGEILKNKESK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=55055 ANG_RS00445 WP_025271540.1 91793..92566(-) (recO) [Streptococcus anginosus subsp. whileyi MAS624]
ATGCTGAAATCCATCACAAGTAAAGGTTTGGTTCTCTATAATCGTAATTTCCGAGAAAATGATAAGCTGGTCAAAATTTT
CACAGAGCAGGCTGGTAAGCGAATGTTTTTCGTGAAACATGCTAGAAATTCTAAGTTGAATCCAGTTATCCAACCATTGG
TAGTGGCCGATTTTTTGATGAAAATAAATGATGACGGTTTGAGTTATATCGATGATTATCAAGAGGTTACGACTTTCCAG
CATATCAATCATGATTTGTTTGCAATGGCTTATGCGACTTATGTGGTAGCTCTAGCGGACGCTAGTATTCAGGATAATGA
AATAGATTCGGCTCTCTTTGCTTTTTTGCAAAAAACGTTGGAATTGATGGAGCAGGGCTTGGATTATGAGGTGTTGACCA
ATATTTTTGAGATTCAAATTTTGTCACGTTTTGGTGTTTCTTTGAATTTCCATGAATGCTGCTTTTGCCACCGAGTAGGG
CTACCGTTTGATTTTTCCTTTACTTATAATGGCGTTTTATGTCCGGAACATTATGGCAAAGATGAGCGACGGAGTCATTT
GGATCCCAACATTCCTTACTTATTGGACCAATTTCAAGCGGTTCAATTTAGTGAACTGGAGACCATTTCTTTGAAGCCTG
AATTGAAAAGACAATTGCGAAAAGTGATTGATCAAATTTATGAAGAATATGTTGGGATTCATCTAAAGCCCAAAAAATTT
ATTGATTCTCTGGGAGACTGGGGAGAAATTTTAAAGAACAAGGAGTCGAAATGA

Domains

Predicted by InterProScan.

Recombination protein O C terminal (RecO_C)

(84-236)

Recombination protein O N terminal (RecO_N)

(4-75)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

76.078

99.222

0.755

Multiple sequence alignment