Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   J5M87_RS07140 Genome accession   NZ_CP072115
Coordinates   1508718..1509767 (-) Length   349 a.a.
NCBI ID   WP_154608494.1    Uniprot ID   A0A6I4RIY2
Organism   Streptococcus zhangguiae strain zg-86     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1503718..1514767
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J5M87_RS07120 (J5M87_07120) trpB 1504331..1505521 (-) 1191 WP_154608490.1 tryptophan synthase subunit beta -
  J5M87_RS07125 (J5M87_07125) - 1506050..1506565 (-) 516 WP_154608491.1 VanZ family protein -
  J5M87_RS07130 (J5M87_07130) rlmN 1506562..1507674 (-) 1113 WP_154608492.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  J5M87_RS07135 (J5M87_07135) - 1507682..1508248 (-) 567 WP_154608493.1 YutD-like domain-containing protein -
  J5M87_RS07140 (J5M87_07140) sepM 1508718..1509767 (-) 1050 WP_154608494.1 SepM family pheromone-processing serine protease Regulator
  J5M87_RS07145 (J5M87_07145) coaD 1509754..1510242 (-) 489 WP_154608495.1 pantetheine-phosphate adenylyltransferase -
  J5M87_RS07150 (J5M87_07150) rsmD 1510232..1510771 (-) 540 WP_154608496.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  J5M87_RS07155 (J5M87_07155) - 1511191..1511574 (-) 384 WP_154608497.1 rhodanese-like domain-containing protein -
  J5M87_RS07160 (J5M87_07160) - 1511578..1511790 (-) 213 WP_154608498.1 YqgQ family protein -
  J5M87_RS07165 (J5M87_07165) - 1511844..1512023 (-) 180 WP_154608499.1 hypothetical protein -
  J5M87_RS07170 (J5M87_07170) - 1512671..1513273 (-) 603 WP_154608500.1 response regulator transcription factor -
  J5M87_RS07175 (J5M87_07175) - 1513254..1514369 (-) 1116 WP_154608501.1 sensor histidine kinase -

Sequence


Protein


Download         Length: 349 a.a.        Molecular weight: 37628.16 Da        Isoelectric Point: 5.9473

>NTDB_id=550546 J5M87_RS07140 WP_154608494.1 1508718..1509767(-) (sepM) [Streptococcus zhangguiae strain zg-86]
MKKNKKLLLILSIVLSTVLLWVAFLFPLPYYVESPGGASDIRSVLTVAGKKDDKPGSYNFVYVQVKPATAVQLLLAALDS
HSDIIPKQELAGGANSEEFYRISQFYMETSQNMAKYQGLKLAKKDTSLEFFGVYVLNVTEDSTFKQILNIADTVVSVNGK
TFKSSPELIDYVSGLTLGSDVEVGYLSSGKELTAKGKIIKLENGKNGIGIGLVDHTEVKSSEKIDFQTGNIGGPSAGLMF
TLAIYTQLADPDLRDGRVIAGTGTIEQDGSVGDIGGADKKVLSAAKAGASIFFAPNNPVDPEILKQKPDAKTNYEEAMEA
VKKDKLTIQVVPVTNVQEAIDYLKKTKGQ

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=550546 J5M87_RS07140 WP_154608494.1 1508718..1509767(-) (sepM) [Streptococcus zhangguiae strain zg-86]
ATGAAAAAAAATAAAAAATTACTTCTGATTCTCTCGATAGTTCTCTCGACTGTCCTTTTGTGGGTAGCCTTTCTCTTTCC
ACTTCCCTACTATGTCGAAAGTCCAGGTGGAGCTTCTGATATTCGAAGTGTCTTGACCGTGGCTGGGAAAAAAGACGACA
AACCGGGTTCTTATAATTTTGTCTATGTTCAAGTCAAACCTGCTACTGCTGTTCAACTCTTGCTTGCTGCCCTAGATTCT
CATTCGGACATCATTCCAAAGCAAGAATTGGCAGGTGGCGCAAATAGCGAGGAGTTTTACCGGATTAGTCAATTTTATAT
GGAAACCTCTCAAAATATGGCGAAATATCAAGGTTTAAAACTAGCTAAGAAAGACACCTCTTTGGAGTTCTTTGGAGTCT
ATGTTCTCAATGTGACGGAAGATTCGACTTTTAAGCAGATTTTGAATATTGCAGACACCGTTGTGAGTGTGAATGGCAAG
ACCTTTAAGAGTTCTCCTGAACTCATTGACTATGTCAGTGGTTTAACATTAGGCAGCGATGTTGAGGTTGGTTATCTCAG
TTCTGGTAAGGAATTGACCGCCAAAGGAAAAATTATTAAACTCGAAAACGGAAAAAATGGTATTGGCATTGGCCTAGTTG
ACCATACCGAGGTTAAAAGTAGTGAAAAGATTGATTTCCAAACTGGTAATATCGGTGGTCCGAGTGCAGGCTTGATGTTT
ACACTTGCCATTTACACACAGTTAGCTGATCCTGATTTGCGAGACGGACGAGTAATTGCAGGTACTGGAACGATTGAGCA
AGACGGTTCTGTCGGTGATATTGGTGGAGCGGATAAGAAGGTCTTGTCTGCTGCAAAAGCTGGGGCAAGTATCTTCTTTG
CTCCCAATAATCCTGTTGATCCTGAAATCTTAAAACAAAAACCAGATGCTAAAACGAACTATGAAGAAGCAATGGAAGCT
GTGAAAAAAGATAAATTGACTATTCAGGTTGTTCCAGTGACCAATGTCCAGGAAGCGATTGATTATCTGAAAAAAACCAA
GGGCCAGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6I4RIY2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

60.58

98.854

0.599