Detailed information    

insolico Bioinformatically predicted

Overview

Name   oppA   Type   Regulator
Locus tag   J5M87_RS04415 Genome accession   NZ_CP072115
Coordinates   910003..911790 (+) Length   595 a.a.
NCBI ID   WP_154608621.1    Uniprot ID   A0A6I4RAW8
Organism   Streptococcus zhangguiae strain zg-86     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 905003..916790
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J5M87_RS04385 (J5M87_04385) - 905564..906187 (+) 624 WP_154608626.1 hypothetical protein -
  J5M87_RS04390 (J5M87_04390) - 906406..907311 (+) 906 WP_154608625.1 LysR family transcriptional regulator -
  J5M87_RS04395 (J5M87_04395) lspA 907313..907777 (+) 465 WP_154608624.1 signal peptidase II -
  J5M87_RS04400 (J5M87_04400) - 907761..908651 (+) 891 WP_154608623.1 RluA family pseudouridine synthase -
  J5M87_RS04405 (J5M87_04405) - 908711..909046 (+) 336 WP_067089781.1 zinc ribbon domain-containing protein YjdM -
  J5M87_RS04410 (J5M87_04410) - 909124..909768 (+) 645 WP_154608622.1 Pr6Pr family membrane protein -
  J5M87_RS04415 (J5M87_04415) oppA 910003..911790 (+) 1788 WP_154608621.1 oligopeptide ABC transporter substrate-binding protein Regulator
  J5M87_RS04420 (J5M87_04420) pyrR 912204..912734 (+) 531 WP_154608620.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  J5M87_RS04425 (J5M87_04425) - 912747..913679 (+) 933 WP_154608619.1 aspartate carbamoyltransferase catalytic subunit -
  J5M87_RS04430 (J5M87_04430) - 913723..914811 (+) 1089 WP_154608618.1 carbamoyl phosphate synthase small subunit -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 65809.94 Da        Isoelectric Point: 4.5773

>NTDB_id=550536 J5M87_RS04415 WP_154608621.1 910003..911790(+) (oppA) [Streptococcus zhangguiae strain zg-86]
MKKTTKMFSLAAVTLLSASVLAACGSKKASNAEQENLSFQTEVTNEGTPIKGGQLNYAIVAASASTGLLMDELSDNTVDS
SFGGLVDESMFGYDGDRKLDDSGLAKVDFDLKGKKLTVTLTGKDYKWSDGQPFTIDDYIFTIEKMADKGYTGVRFDERFT
NIVGMDDFVAGKADKISGIEKVDDYTAVLTVKEMTPSMMYAGGNVPAYVMPKHIFKDIPVADWEKSDYARATTKFVGMGA
FKIKEVVGGESVTFVANENYFDGKPKVDSVKMDIVSPDTIVSEMKAGHYDIAEMPSDQLDSFKDLSNITVLGRLASSYEY
VSFNLGKYDKDANKNVMNPDAKMNDVKLRQAMGYALDNKTAGDKLYNGLYHPATSLIISFFGDLHDSELEGYTYNPEKAK
KLLDEAGYKDVDGDGIREDKNGKPFKISLAARKRTEANEALVQQYINWWKEVGLNVELYTGRTIELNSFYDMIQANDANI
DAYIGGWSTGYDPNPTGLWGPEAQFNMSRYVSDENTELLKAIGSEESFDEKKNLENYKKWQKYAFEQAFAIPTFESETLT
AVNKRVKYSDTLLGSASKAPLNKVELTADQGVAEK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=550536 J5M87_RS04415 WP_154608621.1 910003..911790(+) (oppA) [Streptococcus zhangguiae strain zg-86]
ATGAAAAAGACAACAAAAATGTTCTCACTGGCTGCAGTGACTCTCTTATCCGCTTCTGTATTAGCAGCATGTGGATCAAA
AAAAGCATCAAATGCTGAACAAGAAAACTTATCATTCCAAACGGAAGTAACAAATGAAGGGACTCCAATCAAAGGTGGTC
AACTCAACTATGCAATTGTAGCTGCTTCAGCTTCTACAGGATTGTTGATGGATGAATTGTCAGATAATACCGTTGATAGT
TCTTTTGGTGGTCTGGTTGATGAGTCCATGTTTGGATATGACGGTGACCGTAAGCTAGATGATTCAGGCCTTGCCAAGGT
TGACTTCGATTTAAAAGGTAAAAAACTTACTGTGACATTGACTGGTAAGGATTATAAGTGGTCTGATGGACAGCCATTTA
CAATTGATGATTATATCTTTACCATTGAAAAAATGGCTGATAAAGGCTATACTGGTGTGCGTTTTGATGAGCGTTTCACA
AATATCGTCGGAATGGATGATTTTGTCGCTGGAAAAGCAGATAAGATTTCAGGGATTGAAAAAGTTGACGATTATACAGC
TGTCCTAACTGTGAAAGAAATGACTCCTTCAATGATGTATGCAGGAGGAAATGTTCCAGCCTATGTTATGCCAAAACACA
TCTTCAAGGATATTCCTGTTGCTGATTGGGAAAAGAGTGACTATGCACGTGCAACGACTAAGTTTGTTGGTATGGGCGCA
TTCAAAATAAAGGAGGTTGTCGGTGGTGAATCGGTTACCTTTGTAGCGAATGAAAATTACTTTGACGGCAAACCAAAAGT
TGATAGTGTGAAGATGGATATTGTATCTCCTGATACCATTGTGTCAGAGATGAAAGCAGGTCACTATGATATAGCTGAAA
TGCCAAGTGACCAATTAGATTCCTTTAAAGACTTATCTAATATCACAGTCCTTGGTCGTCTTGCTTCTAGCTACGAATAT
GTATCGTTCAATCTTGGAAAATATGACAAGGATGCCAATAAAAATGTTATGAATCCTGATGCCAAGATGAATGATGTGAA
ATTGCGTCAAGCTATGGGGTATGCACTTGATAATAAGACTGCAGGAGATAAGCTCTACAATGGTTTGTATCACCCAGCAA
CTTCATTGATTATTTCATTCTTTGGTGATTTACATGATTCAGAGTTAGAAGGCTACACTTACAACCCAGAAAAAGCGAAG
AAATTACTCGATGAAGCAGGTTATAAAGATGTAGACGGAGACGGTATCCGTGAAGATAAGAATGGAAAACCATTCAAGAT
TAGTCTTGCAGCTCGTAAACGGACTGAGGCAAATGAAGCTCTCGTACAACAATACATTAACTGGTGGAAAGAAGTTGGCT
TAAATGTTGAACTCTACACAGGTCGTACGATTGAATTGAATTCATTCTATGATATGATTCAAGCAAATGATGCCAATATT
GATGCTTACATTGGTGGTTGGTCAACAGGTTACGATCCAAATCCAACAGGTTTGTGGGGACCAGAAGCTCAATTCAATAT
GTCTCGTTACGTATCAGATGAAAATACTGAGTTACTCAAGGCTATCGGTTCAGAAGAATCATTTGACGAGAAGAAAAATC
TTGAAAATTACAAGAAATGGCAAAAATATGCCTTTGAGCAAGCATTTGCGATTCCAACCTTCGAATCAGAAACCCTTACA
GCTGTCAATAAACGTGTTAAATATTCAGATACACTATTAGGATCAGCTTCTAAAGCACCATTGAATAAGGTTGAATTAAC
AGCTGATCAAGGTGTAGCTGAGAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(113-505)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I4RAW8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  oppA Streptococcus suis isolate S10

74.118

100

0.741