Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   J5M87_RS02195 Genome accession   NZ_CP072115
Coordinates   415908..417656 (+) Length   582 a.a.
NCBI ID   WP_154608127.1    Uniprot ID   A0A6I4RBX7
Organism   Streptococcus zhangguiae strain zg-86     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 410908..422656
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J5M87_RS02175 (J5M87_02175) - 411533..412444 (+) 912 WP_154608123.1 XRE family transcriptional regulator -
  J5M87_RS02180 (J5M87_02180) - 412637..413545 (+) 909 WP_154608124.1 helix-turn-helix domain-containing protein -
  J5M87_RS02185 (J5M87_02185) - 413703..414155 (+) 453 WP_160463216.1 MarR family winged helix-turn-helix transcriptional regulator -
  J5M87_RS02190 (J5M87_02190) rcrP 414152..415918 (+) 1767 WP_154608126.1 ABC transporter ATP-binding protein Regulator
  J5M87_RS02195 (J5M87_02195) rcrQ 415908..417656 (+) 1749 WP_154608127.1 ABC transporter ATP-binding protein Regulator
  J5M87_RS02200 (J5M87_02200) - 418021..418458 (+) 438 WP_154608128.1 CoA-binding protein -
  J5M87_RS02205 (J5M87_02205) - 418458..418955 (+) 498 WP_160463215.1 kinase -
  J5M87_RS02210 (J5M87_02210) - 419009..420091 (+) 1083 WP_154608130.1 lipopolysaccharide assembly protein LapB -
  J5M87_RS02215 (J5M87_02215) efeO 420300..421157 (+) 858 WP_154608131.1 iron uptake system protein EfeO -
  J5M87_RS02220 (J5M87_02220) efeB 421161..422393 (+) 1233 WP_154608132.1 iron uptake transporter deferrochelatase/peroxidase subunit -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 64084.28 Da        Isoelectric Point: 6.5712

>NTDB_id=550525 J5M87_RS02195 WP_154608127.1 415908..417656(+) (rcrQ) [Streptococcus zhangguiae strain zg-86]
MENKQTSLLNQMKPYIKGFQLPFVIAIIGAIISSIITVIGPNKLSEITDLITKGLMTGIDTDKVSEIAMLLAILYGIGAL
VNYTQAFTISTIVQHFSKRLRTAIAEKINKLPLRYFDSHSQGDTLSRVTNDVDTASQSLNQSLGTVLSSSILLVAALIMM
FQTNVTLSFVTIVSVLFGFVFVGIIMGRAKGFFKSQQTNLANVNGYVEEMYSGHSVVASYHAGRIVKEEFQHLNQALYTS
MWKSQFISGIMMPMMMFIGNFGYVMVVVTGAALTLKGNATMGTIVAFMVYVRIFSQPLSQIAQGLTVLQSASAAMGRVFE
FLGEPEMEVDSHKAQQLRTIKGDVTFDHVSFGYSADKTIIHDFSATAKAGQKIAIVGPTGAGKTTIVNLLMKFYDIDQGR
ILIDGIDTKNMKRSEVHDAFSMVLQDTWLFEGTIKENLIYNQSNVSDEAVIEAAKAVGVHHFIMTLPKGYDTLLDDTVNL
SVGQKQLLTIARALLKNAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HDALMAQNDFYANLYNSQFVEE

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=550525 J5M87_RS02195 WP_154608127.1 415908..417656(+) (rcrQ) [Streptococcus zhangguiae strain zg-86]
ATGGAAAATAAACAAACTTCTTTATTGAACCAAATGAAACCCTATATCAAAGGTTTCCAACTTCCTTTTGTGATTGCAAT
CATTGGAGCCATTATTTCCAGTATCATTACTGTGATTGGTCCGAATAAATTAAGTGAGATTACAGACTTGATTACCAAGG
GATTAATGACAGGAATTGACACAGATAAGGTGTCAGAAATTGCGATGTTACTAGCGATTCTGTACGGAATTGGAGCGCTT
GTCAACTATACGCAAGCCTTTACTATTTCAACAATTGTTCAGCATTTTTCAAAACGGTTGCGGACAGCGATTGCAGAAAA
AATCAACAAACTTCCTCTCCGTTATTTTGATAGTCATTCGCAAGGTGATACCTTATCCCGTGTCACCAATGATGTGGATA
CGGCTAGTCAGTCCCTCAACCAGAGTTTGGGAACGGTCCTGTCTTCTAGTATTCTCTTGGTGGCAGCTCTGATTATGATG
TTTCAGACCAATGTGACCTTATCCTTTGTCACCATTGTTTCTGTCTTGTTTGGCTTTGTATTTGTGGGAATCATTATGGG
GCGTGCAAAGGGCTTCTTCAAAAGTCAGCAGACCAATCTTGCCAATGTTAATGGCTATGTAGAAGAAATGTATTCTGGGC
ATTCGGTGGTTGCTAGCTATCATGCGGGTCGTATTGTAAAAGAAGAGTTTCAGCATCTCAATCAAGCCCTCTACACAAGT
ATGTGGAAATCCCAATTCATTTCAGGGATTATGATGCCCATGATGATGTTTATTGGGAACTTTGGTTACGTCATGGTTGT
AGTGACAGGAGCAGCCTTGACCCTGAAAGGCAATGCAACCATGGGAACGATTGTGGCCTTCATGGTCTATGTTCGAATCT
TCTCTCAACCCCTTTCTCAGATTGCCCAAGGTTTGACAGTCTTACAATCAGCTAGCGCTGCGATGGGTCGTGTGTTTGAA
TTCTTGGGTGAGCCTGAAATGGAGGTGGACAGCCATAAGGCACAACAACTCAGGACTATAAAAGGCGATGTTACATTTGA
TCACGTTTCCTTTGGCTATTCTGCTGATAAGACCATTATCCATGACTTCTCCGCAACAGCTAAGGCCGGGCAAAAAATTG
CTATTGTGGGACCAACAGGAGCTGGAAAGACGACCATTGTCAATCTCTTGATGAAGTTCTATGACATTGATCAAGGCCGT
ATTTTGATTGACGGGATTGATACCAAAAATATGAAACGTTCTGAAGTTCATGATGCTTTTAGTATGGTCTTACAAGATAC
CTGGCTCTTTGAGGGAACGATTAAGGAAAATCTGATTTACAACCAAAGCAATGTTTCAGATGAAGCGGTTATCGAAGCAG
CAAAAGCAGTCGGAGTTCACCATTTTATCATGACCTTGCCGAAAGGCTACGATACCCTGCTAGATGATACGGTAAACTTA
TCTGTCGGGCAAAAACAATTGCTAACCATTGCACGTGCCTTGCTGAAAAATGCTCCCCTTCTTATCCTTGATGAGGCAAC
CAGCTCTGTTGATACACGGACAGAGGAATTGATCCAGAAGGCAATGGATAAACTGATGGAAGGCCGTACGTCCTTTGTCA
TCGCTCACCGTCTATCCACTATCCGAAATGCTGATCTCATCTTAGTGATGAAAGACGGCAATATCATTGAACAAGGCAAT
CATGATGCTCTGATGGCTCAAAATGACTTCTATGCCAATCTGTACAACAGCCAGTTTGTCGAGGAGTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(24-298)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I4RBX7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

69.759

100

0.698