Detailed information    

insolico Bioinformatically predicted

Overview

Name   oppA   Type   Regulator
Locus tag   J5M87_RS01840 Genome accession   NZ_CP072115
Coordinates   347915..349699 (+) Length   594 a.a.
NCBI ID   WP_154609081.1    Uniprot ID   A0A6I4RL53
Organism   Streptococcus zhangguiae strain zg-86     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 342915..354699
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J5M87_RS01825 (J5M87_01825) sufU 343968..344402 (+) 435 WP_154609078.1 Fe-S cluster assembly sulfur transfer protein SufU -
  J5M87_RS01830 (J5M87_01830) sufB 344433..345845 (+) 1413 WP_154632455.1 Fe-S cluster assembly protein SufB -
  J5M87_RS01835 (J5M87_01835) pbp3 346474..347706 (-) 1233 WP_154609080.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  J5M87_RS01840 (J5M87_01840) oppA 347915..349699 (+) 1785 WP_154609081.1 oligopeptide ABC transporter substrate-binding protein Regulator
  J5M87_RS01845 (J5M87_01845) - 349950..350951 (+) 1002 WP_160463312.1 ABC transporter ATP-binding protein -
  J5M87_RS01850 (J5M87_01850) - 350951..351895 (+) 945 WP_154609082.1 ATP-binding cassette domain-containing protein -
  J5M87_RS01855 (J5M87_01855) opp4B 351898..352854 (+) 957 WP_154609083.1 oligopeptide ABC transporter permease -
  J5M87_RS01860 (J5M87_01860) - 352867..353769 (+) 903 WP_160463311.1 ABC transporter permease -

Sequence

Protein


Download         Length: 594 a.a.        Molecular weight: 65973.14 Da        Isoelectric Point: 4.5994

>NTDB_id=550523 J5M87_RS01840 WP_154609081.1 347915..349699(+) (oppA) [Streptococcus zhangguiae strain zg-86]
MKKSTKMLTLAGVTLLSVATLAACGSKSSSSKDAATSNLTFPTEVTHDGTAIKGGQLNYAIVSPAAATGLLIDELADNAL
DLAFAGMVDESMFGYDGNRKLNDSGLAKVDFDVEAKKLTVSLTGKDYKWSDGEPFTIDDYIFTIEKMADKDYEGVRFDDS
YTNIVGMEEFVDGKADKISGIEKVDDYTAVLTVKEMNPSMQYAGGTVPHFVMPKHIYKDIAVKDWATSEYSRTAKTVGLG
KFKIKDIVNGESITYVPNEHYFKGKPKVDTLKVDIVSPDTIVSEMKAGHYDIAEMPEDQLDSYKDLKNITLVGEVSSSYE
YLSFNFGTYDKEAQKSVTNPNAKMSDVKLRQAMGYALDTKTAGEKLYNGLYHPANSLLISFFADLHDSELEGYTYNPEKA
KQLLDEAGYKDVDGDGIREDKDGKPFKISLAARKRTETNESLVQQYIAWWKEVGLNVELYTGRTIELNSFYDMLKANDAN
IDAYLAGFGTGYDPLPKVWGPTNAFNMSRYVSDENTKLLEAMASVESFDEKKNLENYKKWQENAFKEAFAIPLFESETIT
AINKRVKYYDTYKGSDTKSAIEQIELTADKGIAE

Nucleotide


Download         Length: 1785 bp        

>NTDB_id=550523 J5M87_RS01840 WP_154609081.1 347915..349699(+) (oppA) [Streptococcus zhangguiae strain zg-86]
ATGAAGAAGTCGACAAAAATGCTCACTCTTGCGGGTGTGACATTATTATCAGTTGCAACACTTGCAGCTTGTGGTTCAAA
AAGCTCATCTAGCAAAGATGCGGCTACATCAAACTTAACATTTCCAACAGAAGTGACCCATGATGGTACTGCGATTAAAG
GTGGACAATTGAATTATGCTATTGTATCTCCAGCAGCAGCTACGGGTCTGTTGATTGATGAATTGGCAGATAATGCGCTT
GACCTTGCCTTTGCTGGTATGGTTGATGAGAGCATGTTTGGCTATGATGGCAACCGGAAACTTAACGATTCAGGTCTTGC
GAAGGTAGATTTTGATGTTGAAGCGAAGAAATTGACGGTTAGCTTGACTGGTAAAGACTACAAGTGGTCTGATGGGGAGC
CATTTACAATTGACGACTATATCTTCACCATTGAAAAGATGGCTGATAAAGATTATGAAGGTGTCCGTTTTGACGACTCG
TATACAAACATCGTCGGAATGGAAGAGTTTGTAGATGGAAAAGCAGACAAAATTTCAGGTATTGAAAAGGTTGATGACTA
CACTGCTGTTCTTACTGTAAAAGAAATGAATCCTTCTATGCAGTATGCAGGTGGTACTGTGCCACACTTTGTCATGCCAA
AACACATCTATAAAGATATTGCAGTAAAAGACTGGGCGACAAGCGAATACTCACGTACAGCTAAAACAGTTGGTTTGGGT
AAATTTAAAATCAAAGATATTGTCAACGGTGAATCGATTACTTATGTGCCAAATGAACACTACTTCAAGGGCAAACCAAA
AGTTGATACATTAAAAGTGGACATTGTTTCACCAGATACCATTGTATCAGAAATGAAAGCTGGTCATTATGATATTGCGG
AAATGCCTGAAGATCAACTTGATTCTTACAAGGATTTGAAAAACATCACACTTGTCGGAGAAGTTTCTAGTTCTTATGAA
TACCTATCATTTAACTTTGGTACCTATGACAAAGAAGCTCAGAAGAGTGTTACAAATCCAAATGCTAAGATGAGTGATGT
GAAATTGCGTCAGGCAATGGGATATGCTCTTGACACCAAGACAGCGGGAGAAAAACTTTACAATGGCTTGTATCACCCAG
CAAACTCTCTTCTCATCTCATTCTTTGCTGACTTGCATGATTCAGAATTAGAAGGTTACACATACAATCCAGAAAAAGCA
AAACAATTACTTGATGAAGCTGGATATAAAGACGTAGATGGAGATGGTATCCGTGAAGATAAGGATGGTAAACCATTCAA
GATTAGTCTTGCAGCACGTAAACGGACAGAAACAAACGAATCCCTCGTACAACAGTACATTGCTTGGTGGAAAGAAGTCG
GCTTGAACGTTGAACTTTACACAGGACGTACAATCGAGTTGAACTCATTCTACGATATGCTTAAGGCAAACGATGCGAAT
ATTGATGCTTATCTAGCTGGATTTGGTACTGGTTATGATCCGCTTCCTAAAGTATGGGGACCAACGAATGCATTTAACAT
GTCTCGTTATGTATCAGATGAAAATACAAAACTACTCGAAGCAATGGCTTCAGTTGAATCGTTCGACGAGAAGAAAAATC
TTGAAAACTACAAGAAATGGCAAGAAAATGCCTTCAAGGAAGCATTTGCAATTCCATTGTTTGAATCAGAAACGATTACC
GCAATTAACAAACGTGTGAAATACTACGATACTTATAAAGGTTCAGATACTAAATCAGCAATTGAACAAATTGAGTTGAC
TGCTGATAAAGGTATCGCTGAGTAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(125-497)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I4RL53

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  oppA Streptococcus suis isolate S10

71.98

100

0.722