Detailed information
Bioinformatically predicted
Overview
| Name | pilM | Type | Machinery gene |
| Locus tag | PCC7418_RS00675 | Genome accession | NC_019779 |
| Coordinates | 156348..157400 (+) | Length | 350 a.a. |
| NCBI ID | WP_051030509.1 | Uniprot ID | - |
| Organism | Halothece sp. PCC 7418 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 151348..162400
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PCC7418_RS00645 (PCC7418_0129) | - | 151776..152570 (+) | 795 | WP_015224250.1 | fumarylacetoacetate hydrolase family protein | - |
| PCC7418_RS00650 (PCC7418_0130) | - | 152574..153056 (-) | 483 | WP_015224251.1 | Tic20 family protein | - |
| PCC7418_RS00655 (PCC7418_0131) | - | 153075..153308 (-) | 234 | WP_015224252.1 | hypothetical protein | - |
| PCC7418_RS00660 (PCC7418_0132) | rdgB | 153383..153949 (+) | 567 | WP_015224253.1 | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | - |
| PCC7418_RS00665 (PCC7418_0133) | - | 154099..155241 (+) | 1143 | WP_015224254.1 | RNA-guided endonuclease TnpB family protein | - |
| PCC7418_RS00670 (PCC7418_0134) | - | 155383..155721 (-) | 339 | WP_015224255.1 | P-II family nitrogen regulator | - |
| PCC7418_RS00675 (PCC7418_0135) | pilM | 156348..157400 (+) | 1053 | WP_051030509.1 | type IV pilus assembly protein PilM | Machinery gene |
| PCC7418_RS00680 (PCC7418_0136) | - | 157406..158155 (+) | 750 | WP_015224256.1 | PilN domain-containing protein | - |
| PCC7418_RS00685 (PCC7418_0137) | - | 158193..158987 (+) | 795 | WP_015224257.1 | hypothetical protein | - |
| PCC7418_RS00690 (PCC7418_0138) | - | 159056..161491 (+) | 2436 | WP_015224258.1 | type IV pilus secretin family protein | - |
| PCC7418_RS00695 (PCC7418_0139) | - | 161548..161859 (-) | 312 | WP_015224259.1 | Txe/YoeB family addiction module toxin | - |
| PCC7418_RS00700 (PCC7418_0140) | - | 161840..162130 (-) | 291 | WP_015224260.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 39047.35 Da Isoelectric Point: 3.9894
>NTDB_id=55048 PCC7418_RS00675 WP_051030509.1 156348..157400(+) (pilM) [Halothece sp. PCC 7418]
MELTPNQINVAQIRNTDRGYELEVLASKEVPEGVYSDGKIIDPPTLADLIQETLSENNIKAKSVAAAVPMRDSMLNLIPV
PAELSEEELRDVVLNQEAGLYLPYPIEEVDLDYQKLGYFPDEDGIEKVQVLLISTRREVTDTYLDIFEQQVGLRMDALEI
NTVALIRTIREQLRQYPSQEAVVLVDIEFDNTELAIIVDGVPEFNRTIPIGTFQLQSALSRAMRLPPSRNIETLQEMTLP
ISDKEAKEETTPLNPGMNALQRVLGELTDEVRRSVDYYLNQSEGMEVVQMLLAGPGAGIGQIDAFFNQRLNIPTTQIDPV
EALSLETEIDINNSQRPGLGTVLGLALKEI
MELTPNQINVAQIRNTDRGYELEVLASKEVPEGVYSDGKIIDPPTLADLIQETLSENNIKAKSVAAAVPMRDSMLNLIPV
PAELSEEELRDVVLNQEAGLYLPYPIEEVDLDYQKLGYFPDEDGIEKVQVLLISTRREVTDTYLDIFEQQVGLRMDALEI
NTVALIRTIREQLRQYPSQEAVVLVDIEFDNTELAIIVDGVPEFNRTIPIGTFQLQSALSRAMRLPPSRNIETLQEMTLP
ISDKEAKEETTPLNPGMNALQRVLGELTDEVRRSVDYYLNQSEGMEVVQMLLAGPGAGIGQIDAFFNQRLNIPTTQIDPV
EALSLETEIDINNSQRPGLGTVLGLALKEI
Nucleotide
Download Length: 1053 bp
>NTDB_id=55048 PCC7418_RS00675 WP_051030509.1 156348..157400(+) (pilM) [Halothece sp. PCC 7418]
ATTGAGCTAACCCCAAACCAAATTAATGTCGCTCAAATTCGTAATACAGATCGAGGGTATGAACTCGAAGTTCTAGCGAG
TAAAGAAGTTCCCGAAGGGGTTTATTCCGATGGTAAAATCATCGATCCACCGACCTTAGCCGATTTAATTCAGGAGACCC
TTTCTGAAAATAATATTAAGGCAAAAAGTGTGGCTGCTGCTGTGCCCATGCGGGATTCAATGCTGAACTTAATTCCCGTG
CCAGCAGAACTTTCTGAGGAGGAACTGCGGGATGTGGTTCTTAATCAAGAAGCGGGGCTTTATTTACCCTATCCCATCGA
AGAAGTAGATTTAGATTATCAGAAATTAGGGTACTTTCCCGATGAAGATGGCATTGAAAAAGTGCAAGTCTTGCTGATTT
CCACGCGCCGTGAAGTCACGGATACTTATCTTGATATCTTTGAGCAACAAGTCGGTTTACGAATGGATGCTCTTGAAATT
AACACGGTTGCTCTAATTCGCACGATTCGGGAACAATTACGACAGTATCCCTCTCAGGAAGCAGTGGTCTTGGTCGATAT
CGAATTTGACAATACAGAATTAGCCATTATTGTTGATGGTGTTCCAGAATTTAATCGCACCATTCCCATTGGAACTTTTC
AGTTGCAAAGTGCCTTAAGCCGAGCGATGCGTTTGCCTCCCTCTCGCAATATTGAAACCTTACAAGAAATGACACTGCCC
ATTTCGGATAAAGAAGCGAAAGAAGAAACTACCCCTCTTAATCCAGGGATGAATGCTTTACAGCGTGTTTTAGGGGAATT
GACGGATGAAGTTCGTCGCTCCGTTGATTATTATCTGAATCAAAGTGAGGGCATGGAAGTTGTACAAATGTTGTTAGCAG
GTCCTGGGGCTGGCATTGGACAAATTGATGCCTTTTTTAACCAACGCTTAAATATTCCAACCACACAAATTGATCCCGTT
GAGGCTTTATCGTTAGAAACAGAAATCGACATTAATAATTCACAACGTCCAGGTTTAGGAACAGTTTTAGGCTTAGCATT
GAAGGAGATTTAA
ATTGAGCTAACCCCAAACCAAATTAATGTCGCTCAAATTCGTAATACAGATCGAGGGTATGAACTCGAAGTTCTAGCGAG
TAAAGAAGTTCCCGAAGGGGTTTATTCCGATGGTAAAATCATCGATCCACCGACCTTAGCCGATTTAATTCAGGAGACCC
TTTCTGAAAATAATATTAAGGCAAAAAGTGTGGCTGCTGCTGTGCCCATGCGGGATTCAATGCTGAACTTAATTCCCGTG
CCAGCAGAACTTTCTGAGGAGGAACTGCGGGATGTGGTTCTTAATCAAGAAGCGGGGCTTTATTTACCCTATCCCATCGA
AGAAGTAGATTTAGATTATCAGAAATTAGGGTACTTTCCCGATGAAGATGGCATTGAAAAAGTGCAAGTCTTGCTGATTT
CCACGCGCCGTGAAGTCACGGATACTTATCTTGATATCTTTGAGCAACAAGTCGGTTTACGAATGGATGCTCTTGAAATT
AACACGGTTGCTCTAATTCGCACGATTCGGGAACAATTACGACAGTATCCCTCTCAGGAAGCAGTGGTCTTGGTCGATAT
CGAATTTGACAATACAGAATTAGCCATTATTGTTGATGGTGTTCCAGAATTTAATCGCACCATTCCCATTGGAACTTTTC
AGTTGCAAAGTGCCTTAAGCCGAGCGATGCGTTTGCCTCCCTCTCGCAATATTGAAACCTTACAAGAAATGACACTGCCC
ATTTCGGATAAAGAAGCGAAAGAAGAAACTACCCCTCTTAATCCAGGGATGAATGCTTTACAGCGTGTTTTAGGGGAATT
GACGGATGAAGTTCGTCGCTCCGTTGATTATTATCTGAATCAAAGTGAGGGCATGGAAGTTGTACAAATGTTGTTAGCAG
GTCCTGGGGCTGGCATTGGACAAATTGATGCCTTTTTTAACCAACGCTTAAATATTCCAACCACACAAATTGATCCCGTT
GAGGCTTTATCGTTAGAAACAGAAATCGACATTAATAATTCACAACGTCCAGGTTTAGGAACAGTTTTAGGCTTAGCATT
GAAGGAGATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilM | Synechocystis sp. PCC 6803 |
63.143 |
100 |
0.631 |