Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   J5Z97_RS02520 Genome accession   NZ_CP072112
Coordinates   466374..467183 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain M08500     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 461374..472183
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J5Z97_RS02500 (J5Z97_02500) - 461816..463063 (+) 1248 WP_023611593.1 AMP-binding protein -
  J5Z97_RS02505 (J5Z97_02505) - 463119..464153 (+) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  J5Z97_RS02510 (J5Z97_02510) vicR 464315..465025 (+) 711 WP_002985645.1 response regulator YycF Regulator
  J5Z97_RS02515 (J5Z97_02515) vicK 465018..466370 (+) 1353 WP_002985643.1 cell wall metabolism sensor histidine kinase VicK Regulator
  J5Z97_RS02520 (J5Z97_02520) vicX 466374..467183 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  J5Z97_RS02525 (J5Z97_02525) rnc 467615..468307 (+) 693 WP_002985639.1 ribonuclease III -
  J5Z97_RS02530 (J5Z97_02530) smc 468308..471847 (+) 3540 WP_023611543.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=550475 J5Z97_RS02520 WP_002985641.1 466374..467183(+) (vicX) [Streptococcus pyogenes strain M08500]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=550475 J5Z97_RS02520 WP_002985641.1 466374..467183(+) (vicX) [Streptococcus pyogenes strain M08500]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758