Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   LUY90_RS08830 Genome accession   NZ_CP089477
Coordinates   1727248..1728093 (-) Length   281 a.a.
NCBI ID   WP_001550052.1    Uniprot ID   A0A0H2XGE1
Organism   Staphylococcus aureus strain 0.1345_II_ST5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1722248..1733093
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUY90_RS08795 rpsR 1723233..1723475 (-) 243 WP_000897044.1 30S ribosomal protein S18 -
  LUY90_RS08800 ssb 1723527..1724030 (-) 504 WP_000934799.1 single-stranded DNA-binding protein -
  LUY90_RS08805 rpsF 1724051..1724347 (-) 297 WP_001261460.1 30S ribosomal protein S6 -
  LUY90_RS08810 - 1724591..1724782 (+) 192 WP_001052483.1 hypothetical protein -
  LUY90_RS08815 ychF 1724868..1725965 (-) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  LUY90_RS08820 - 1725977..1726180 (-) 204 WP_000157345.1 DUF951 domain-containing protein -
  LUY90_RS08825 - 1726210..1727091 (-) 882 WP_001077602.1 mechanosensitive ion channel family protein -
  LUY90_RS08830 spo0J 1727248..1728093 (-) 846 WP_001550052.1 ParB/RepB/Spo0J family partition protein Regulator
  LUY90_RS08835 - 1728757..1729860 (+) 1104 WP_000655692.1 PLP-dependent transferase -
  LUY90_RS08840 metC 1729857..1731017 (+) 1161 WP_000175846.1 cystathionine beta-lyase MetC -
  LUY90_RS08845 - 1730986..1732827 (+) 1842 WP_061730365.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32855.86 Da        Isoelectric Point: 10.0091

>NTDB_id=550461 LUY90_RS08830 WP_001550052.1 1727248..1728093(-) (spo0J) [Staphylococcus aureus strain 0.1345_II_ST5]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGTKVDISIKKSVGKISFEFDSQEDFVRIIEQLNRRYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=550461 LUY90_RS08830 WP_001550052.1 1727248..1728093(-) (spo0J) [Staphylococcus aureus strain 0.1345_II_ST5]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGAATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAACGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTGCCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTCAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAGCAAGAACGACAGTTGCGA
GAACAGTATGGTACCAAAGTAGATATATCAATAAAAAAATCGGTTGGTAAAATCTCATTTGAGTTTGATTCACAAGAAGA
TTTTGTGAGAATAATTGAACAATTAAATCGTAGGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XGE1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.379

92.883

0.384