Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   J5V73_RS19700 Genome accession   NZ_CP072057
Coordinates   3875394..3875852 (+) Length   152 a.a.
NCBI ID   WP_002192638.1    Uniprot ID   R8I4H6
Organism   Bacillus mycoides strain JAS12/5     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3870394..3880852
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J5V73_RS19685 (J5V73_19680) - 3871058..3871294 (+) 237 WP_002014830.1 hypothetical protein -
  J5V73_RS19690 (J5V73_19685) - 3871461..3873569 (-) 2109 WP_002014829.1 polyphosphate kinase -
  J5V73_RS19695 (J5V73_19690) - 3873678..3875252 (-) 1575 WP_215576532.1 Ppx/GppA family phosphatase -
  J5V73_RS19700 (J5V73_19695) kre 3875394..3875852 (+) 459 WP_002192638.1 YkyB family protein Regulator
  J5V73_RS19705 (J5V73_19700) - 3875884..3876546 (-) 663 WP_215576533.1 YkyA family protein -
  J5V73_RS19710 (J5V73_19705) - 3877188..3877829 (-) 642 WP_002192636.1 diguanylate cyclase domain-containing protein -
  J5V73_RS19715 (J5V73_19710) - 3877994..3878227 (+) 234 WP_002192635.1 SPP1 phage holin family protein -
  J5V73_RS19720 (J5V73_19715) - 3878259..3878759 (-) 501 WP_002192634.1 hypothetical protein -
  J5V73_RS19725 (J5V73_19720) - 3879185..3880726 (+) 1542 WP_215576534.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17727.42 Da        Isoelectric Point: 10.6793

>NTDB_id=550289 J5V73_RS19700 WP_002192638.1 3875394..3875852(+) (kre) [Bacillus mycoides strain JAS12/5]
MKPSQPQSPLHNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKDDFRTLPHLGHLESSYRNPKTTLSLTIAKKTLQDYIGPEALKQEKKLSEAVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=550289 J5V73_RS19700 WP_002192638.1 3875394..3875852(+) (kre) [Bacillus mycoides strain JAS12/5]
ATGAAACCTTCACAACCACAATCTCCATTGCATAATCAACATTCTATTAATAGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAACCCTAAGTACTTATATTGGTTAAAAAAGACTGCTTTAGAACGCTTAATTACTGAAA
AAAAGGCTATCAAAGAAGGATTACATTTTTCTAGAAATCCACGTTTTAGTCAACAACAATCCGATGTTCTTATACGTTTA
GGTGATTATTTTTTCCATATCCCTCCTACGAAAGATGATTTTCGCACCCTACCGCATCTTGGTCACCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAATAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAGCGAAGCAGTTCCATGGTATAGCCGTACCTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB R8I4H6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

63.793

76.316

0.487