Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   J5V73_RS06120 Genome accession   NZ_CP072057
Coordinates   1201384..1201560 (+) Length   58 a.a.
NCBI ID   WP_002011319.1    Uniprot ID   A0A366GET8
Organism   Bacillus mycoides strain JAS12/5     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1196384..1206560
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J5V73_RS06100 (J5V73_06100) clpB 1196712..1199312 (+) 2601 WP_113769124.1 ATP-dependent chaperone ClpB -
  J5V73_RS06105 (J5V73_06105) - 1199344..1199526 (-) 183 WP_001211112.1 YjzD family protein -
  J5V73_RS06110 (J5V73_06110) - 1199683..1200417 (+) 735 WP_088035111.1 alpha/beta hydrolase -
  J5V73_RS06115 (J5V73_06115) - 1200447..1201319 (+) 873 WP_002188748.1 NAD(P)-dependent oxidoreductase -
  J5V73_RS06120 (J5V73_06120) comZ 1201384..1201560 (+) 177 WP_002011319.1 ComZ family protein Regulator
  J5V73_RS06125 (J5V73_06125) fabH 1201995..1202927 (+) 933 WP_001100550.1 beta-ketoacyl-ACP synthase III -
  J5V73_RS06130 (J5V73_06130) fabF 1202959..1204197 (+) 1239 WP_002030364.1 beta-ketoacyl-ACP synthase II -
  J5V73_RS06135 (J5V73_06135) - 1204313..1205104 (+) 792 WP_002030365.1 DUF2268 domain-containing protein -
  J5V73_RS06140 (J5V73_06140) - 1205246..1205992 (+) 747 WP_002030367.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6491.67 Da        Isoelectric Point: 4.6653

>NTDB_id=550274 J5V73_RS06120 WP_002011319.1 1201384..1201560(+) (comZ) [Bacillus mycoides strain JAS12/5]
MNEKSMQFLQIAMKHLPEAKAILDSNGIALDMEKAQPVLELLMKVMGEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=550274 J5V73_RS06120 WP_002011319.1 1201384..1201560(+) (comZ) [Bacillus mycoides strain JAS12/5]
ATGAACGAAAAAAGTATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCAATTTTAGATTCTAATGG
AATTGCACTTGATATGGAGAAAGCACAGCCGGTGTTAGAGCTATTGATGAAAGTAATGGGCGAAGCATATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A366GET8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586