Detailed information NTG0550200

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LT922_RS23000
• Genome accession: NZ_CP089445
• Coordinates: 4690894..4691877 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain 5-1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4685894..4696877

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LT922_RS22975 (LT922_22975)	-	4687043..4687150 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LT922_RS22980 (LT922_22980)	-	4687526..4687633 (-)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
LT922_RS22985 (LT922_22985)	-	4688009..4688116 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LT922_RS22990 (LT922_22990)	yhjV	4688592..4689863 (+)	1272	WP_001296513.1	aromatic amino acid transport family protein	-
LT922_RS22995 (LT922_22995)	dppF	4689893..4690897 (-)	1005	WP_000103571.1	dipeptide ABC transporter ATP-binding subunit DppF	-
LT922_RS23000 (LT922_23000)	amiE	4690894..4691877 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
LT922_RS23005 (LT922_23005)	dppC	4691888..4692790 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
LT922_RS23010 (LT922_23010)	dppB	4692800..4693819 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
LT922_RS23015 (LT922_23015)	dppA	4694126..4695733 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=550200 LT922_RS23000 WP_001196477.1 4690894..4691877(-) (amiE) [Escherichia coli strain 5-1]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=550200 LT922_RS23000 WP_001196477.1 4690894..4691877(-) (amiE) [Escherichia coli strain 5-1]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCTGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404