Detailed information NTG0549760

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: J5D23_RS06850
• Genome accession: NZ_CP071987
• Coordinates: 1449519..1450961 (+)
• Length: 480 a.a.
• NCBI ID: WP_209613894.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain MT5136
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1444519..1455961

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J5D23_RS06830 (J5D23_06830)	glmS	1445148..1446941 (-)	1794	WP_209613891.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
J5D23_RS06835 (J5D23_06835)	-	1446942..1447181 (-)	240	WP_000461837.1	DUF2443 domain-containing protein	-
J5D23_RS06840 (J5D23_06840)	-	1447226..1447768 (-)	543	WP_209613892.1	purine-nucleoside phosphorylase	-
J5D23_RS06845 (J5D23_06845)	dnaA	1447923..1449290 (+)	1368	WP_209613893.1	chromosomal replication initiator protein DnaA	-
J5D23_RS06850 (J5D23_06850)	comH	1449519..1450961 (+)	1443	WP_209613894.1	competence protein	Machinery gene
J5D23_RS06860 (J5D23_06860)	-	1451141..1451893 (+)	753	WP_002206794.1	exodeoxyribonuclease III	-
J5D23_RS06865 (J5D23_06865)	-	1451890..1452525 (-)	636	WP_000668072.1	outer membrane protein	-
J5D23_RS06870 (J5D23_06870)	-	1452529..1452867 (-)	339	WP_209611758.1	hypothetical protein	-
J5D23_RS06875 (J5D23_06875)	recG	1452944..1454815 (+)	1872	WP_209613895.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 480 a.a.
• Molecular weight: 54816.77 Da
• Isoelectric Point: 7.0707

>NTDB_id=549760 J5D23_RS06850 WP_209613894.1 1449519..1450961(+) (comH) [Helicobacter pylori strain MT5136]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPKQVLGIYNISSNKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKEPHSNPIPSLNAPMQKPQNKPSSSQQSPQNFSYPESKLSSKNSKNSLLQPL
VTPSKVSPTNEVKTPTNDANPPLKHSSQDQENNLFIAPPTEKTLPNNNTPNADANENNESNENRDNMEKQAIRDPNIKEF
ACGKWVYDDENLQAYRPSILKRIDKDKEVTTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQA
RSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQIEPTFYETSELAYSSTRKSEITRNE
LNLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1443 bp

>NTDB_id=549760 J5D23_RS06850 WP_209613894.1 1449519..1450961(+) (comH) [Helicobacter pylori strain MT5136]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTGATTGAGCTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCCAAACAGGTTTTAGGCATTT
ATAATATCTCCTCAAACAAAAAACTCACGCTCACTATCACCCACATATCCACGGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCCAACCGCCCTACTATCCCTAGAAACACCCAAATCGTTTTTTCTTCAAAAGA
ATTGAAAGAACCGCACTCAAACCCAATACCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCAGCTCATCGC
AACAATCCCCTCAAAACTTTTCTTACCCAGAGTCCAAATTAAGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAGTAAGCCCTACTAATGAAGTTAAAACGCCAACAAACGACGCTAATCCCCCTTTAAAACATTCTTC
ACAAGATCAAGAAAACAATCTCTTTATAGCGCCACCCACCGAAAAAACGCTCCCTAATAACAACACCCCTAACGCTGATG
CGAATGAAAACAATGAAAGCAACGAAAATAGGGATAATATGGAAAAACAAGCGATTAGAGATCCCAATATTAAGGAATTT
GCATGCGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCATTGATAAAGACAA
AGAAGTTACAACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTA
AAATCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTTCAAGCC
AGAAGCTCTACAGAAAAATGCAAAAGGGCTAGGGCGAGAAAAGACGGCACGACCAGGCAATGCTATCTGATAGAAGAGCC
TTTAAAACAAGCATGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCGTATATGAACGCCCCAAACAAGACG
ATCAAATAGAGCCAACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAA
TTGAATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAG
TGAATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAGAGCAACCAC
GAGCCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTT
TAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.458	100	0.915