Detailed information NTG0549722

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: J5D26_RS06665
• Genome accession: NZ_CP071985
• Coordinates: 1405712..1407154 (+)
• Length: 480 a.a.
• NCBI ID: WP_209508685.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain MT5119
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1400712..1412154

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J5D26_RS06645 (J5D26_06645)	glmS	1401339..1403132 (-)	1794	WP_209508682.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
J5D26_RS06650 (J5D26_06650)	-	1403133..1403372 (-)	240	WP_000461837.1	DUF2443 domain-containing protein	-
J5D26_RS06655 (J5D26_06655)	-	1403415..1403957 (-)	543	WP_209508683.1	purine-nucleoside phosphorylase	-
J5D26_RS06660 (J5D26_06660)	dnaA	1404110..1405483 (+)	1374	WP_209508684.1	chromosomal replication initiator protein DnaA	-
J5D26_RS06665 (J5D26_06665)	comH	1405712..1407154 (+)	1443	WP_209508685.1	competence protein	Machinery gene
J5D26_RS06675 (J5D26_06675)	-	1407334..1408086 (+)	753	WP_187945941.1	exodeoxyribonuclease III	-
J5D26_RS06680 (J5D26_06680)	-	1408083..1408718 (-)	636	WP_000668036.1	outer membrane protein	-
J5D26_RS06685 (J5D26_06685)	-	1408722..1409069 (-)	348	WP_000837062.1	hypothetical protein	-
J5D26_RS06690 (J5D26_06690)	recG	1409146..1411017 (+)	1872	WP_209508686.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 480 a.a.
• Molecular weight: 54688.62 Da
• Isoelectric Point: 7.1208

>NTDB_id=549722 J5D26_RS06665 WP_209508685.1 1405712..1407154(+) (comH) [Helicobacter pylori strain MT5119]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKILDSKEPKQVLGIYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKEPHSNPIPSLNAPMQKPQNKPSSSQQSPQNFSYPESKLGSKNSKNSLLQPL
VTPSKVSPANEVKTPTNDANPPLKHSSQDQENNLFVAPPTEKTLPNNNTPNADANESNESNENRDNVEKQAIRDPNIKEF
ACGKWVYDDENLQAYRPSILKRVDKDKEVTTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEDPQTFEAKNNFAILQA
RSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQVEPTFYETSELAYSSTRKSEITRNE
LNLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1443 bp

>NTDB_id=549722 J5D26_RS06665 WP_209508685.1 1405712..1407154(+) (comH) [Helicobacter pylori strain MT5119]
ATGAAAAAATCCCTTTGTTTGTCTTTCTTTCTAACCTTCTCTAACCCTCTTCAAGCCCTTGTCATTGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAATCCTTGATTCTAAAGAACCCAAACAAGTTTTGGGCATTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACAGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCCAACCGCCCTACTATTCCCAGAAACACTCAAATCGTTTTTTCTTCAAAAGA
ATTGAAAGAACCGCACTCAAACCCAATACCTTCTTTAAACGCACCCATGCAAAAACCACAAAACAAACCCAGCTCATCGC
AACAATCCCCTCAAAACTTTTCCTATCCAGAATCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAGTAAGCCCTGCTAATGAAGTTAAAACGCCAACAAACGACGCTAATCCCCCTTTAAAACATTCTTC
ACAAGATCAAGAAAACAACCTTTTTGTAGCGCCACCCACTGAAAAAACGCTCCCTAACAACAACACCCCTAACGCTGATG
CGAATGAAAGCAATGAAAGCAACGAAAATAGGGATAATGTGGAAAAACAAGCGATTAGAGATCCTAATATCAAAGAATTC
GCATGCGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATAAAGACAA
AGAGGTTACAACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTA
AAATCTCTGTTCATAAAACAGAGCCTTTAGAAGACCCTCAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTCCAAGCC
AGAAGCTCTACAGAAAAGTGTAAAAGGGCTAGAGCGAGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCC
TTTAAAACAAGCGTGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCGTATATGAACGCCCTAAACAAGACG
ATCAAGTAGAGCCAACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAA
TTGAATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAG
CGAATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAGAGCAACCAC
GAGCCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTT
TAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.667	100	0.917