Detailed information NTG0549702

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: J5D20_RS07025
• Genome accession: NZ_CP071984
• Coordinates: 1481034..1482470 (+)
• Length: 478 a.a.
• NCBI ID: WP_209525750.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain MT5114
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1476034..1487470

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J5D20_RS07005 (J5D20_07005)	glmS	1476670..1478463 (-)	1794	WP_209527903.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
J5D20_RS07010 (J5D20_07010)	-	1478464..1478703 (-)	240	WP_000461837.1	DUF2443 domain-containing protein	-
J5D20_RS07015 (J5D20_07015)	-	1478738..1479280 (-)	543	WP_209526659.1	purine-nucleoside phosphorylase	-
J5D20_RS07020 (J5D20_07020)	dnaA	1479432..1480805 (+)	1374	WP_209525749.1	chromosomal replication initiator protein DnaA	-
J5D20_RS07025 (J5D20_07025)	comH	1481034..1482470 (+)	1437	WP_209525750.1	competence protein	Machinery gene
J5D20_RS07035 (J5D20_07035)	-	1482650..1483402 (+)	753	WP_000767528.1	exodeoxyribonuclease III	-
J5D20_RS07040 (J5D20_07040)	-	1483399..1484034 (-)	636	WP_000668072.1	outer membrane protein	-
J5D20_RS07045 (J5D20_07045)	-	1484038..1484385 (-)	348	WP_000837049.1	hypothetical protein	-
J5D20_RS07050 (J5D20_07050)	recG	1484462..1486333 (+)	1872	WP_209525752.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 478 a.a.
• Molecular weight: 54582.41 Da
• Isoelectric Point: 7.1642

>NTDB_id=549702 J5D20_RS07025 WP_209525750.1 1481034..1482470(+) (comH) [Helicobacter pylori strain MT5114]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPKQVLGVYNISSHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKEPHSNPTPSLNAPMQKPQNKPHSSQQSPQNFSYPESKLGSKNSKNSLLQPL
VTPSKVNSTNETQTTLNPPLKHSSQDQENNLFVAPPTEKTLPSNNTPNADASENNESNENNRDNVEKQAIRDPNIKEFAC
GKWVYDDENLQAYRPSILKRIDKDKEVTTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQARS
STEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQIEPTFYETSELAYSSTRKSEITRNELN
LNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1437 bp

>NTDB_id=549702 J5D20_RS07025 WP_209525750.1 1481034..1482470(+) (comH) [Helicobacter pylori strain MT5114]
ATGAAAAAATCCCTTTGTTTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAACTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAAGCTAAAGTCCTTGATTCCAAAGAACCCAAACAAGTTTTGGGCGTTT
ATAATATCTCCTCACACAAAAAACTCACGCTCACTATCACCCACATATCCACCGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCTAACCGCCCTACTATCCCTAGAAACACCCAAATCGTTTTTTCTTCAAAAGA
ATTGAAAGAACCGCACTCAAACCCAACACCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCCATTCATCGC
AACAATCTCCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAACCTTTA
GTAACTCCTAGCAAAGTAAACTCTACTAACGAAACTCAAACGACACTAAACCCCCCCTTAAAACATTCTTCACAAGATCA
AGAAAACAACCTCTTTGTAGCGCCACCCACTGAAAAAACGCTCCCTAGTAACAACACCCCTAACGCTGATGCGAGTGAAA
ACAATGAAAGCAATGAAAATAATAGGGATAATGTGGAAAAACAAGCGATTAGAGATCCTAATATTAAGGAATTTGCATGC
GGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCATTGATAAAGACAAAGAAGT
TACAACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAATCT
CTGTTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTTCAAGCCAGAAGC
TCTACAGAAAAATGCAAAAGGGCTAGGGCGAGAAAAGACGGCACGACCAGGCAATGCTATCTGATAGAAGAGCCTTTAAA
ACAAGCATGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCGTATATGAACGCCCCAAACAAGACGATCAAA
TAGAGCCAACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTGAAT
TTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAGTGAATA
CAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAGAGCAACCACGAGCCA
AAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.684	100	0.923