Detailed information NTG0549682

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: J5D21_RS07220
• Genome accession: NZ_CP071982
• Coordinates: 1528330..1529772 (-)
• Length: 480 a.a.
• NCBI ID: WP_209611760.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain MT5135
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1523330..1534772

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J5D21_RS07195 (J5D21_07195)	recG	1524476..1526347 (-)	1872	WP_209611757.1	ATP-dependent DNA helicase RecG	-
J5D21_RS07200 (J5D21_07200)	-	1526424..1526762 (+)	339	WP_209611758.1	hypothetical protein	-
J5D21_RS07205 (J5D21_07205)	-	1526766..1527401 (+)	636	WP_164500257.1	outer membrane protein	-
J5D21_RS07210 (J5D21_07210)	-	1527398..1528150 (-)	753	WP_209611759.1	exodeoxyribonuclease III	-
J5D21_RS07220 (J5D21_07220)	comH	1528330..1529772 (-)	1443	WP_209611760.1	competence protein	Machinery gene
J5D21_RS07225 (J5D21_07225)	dnaA	1530002..1531375 (-)	1374	WP_000380638.1	chromosomal replication initiator protein DnaA	-
J5D21_RS07230 (J5D21_07230)	-	1531528..1532070 (+)	543	WP_209611761.1	purine-nucleoside phosphorylase	-
J5D21_RS07235 (J5D21_07235)	-	1532115..1532354 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
J5D21_RS07240 (J5D21_07240)	glmS	1532355..1534148 (+)	1794	WP_209611762.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 480 a.a.
• Molecular weight: 54730.57 Da
• Isoelectric Point: 7.1208

>NTDB_id=549682 J5D21_RS07220 WP_209611760.1 1528330..1529772(-) (comH) [Helicobacter pylori strain MT5135]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPKQVLGIYNISSHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKEPHSNPIPSLNASMQKPQNKPSSSQQSPQNFSYPESKLSSKNSKNSLLQPL
VTPSKVSPANEVKTPTNDANPPLKHSSQDQENNLFVTPPTEKTLPNNNTPNADASENNESNENRDNVEKQAIRDPNIKEF
ACGKWVYDDENLQAYRPSILKRVDKDKEVTTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEDPQTFEAKNNFAILQA
RSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQTEPTFYETSELAYSSTRKSEITRNE
LNLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1443 bp

>NTDB_id=549682 J5D21_RS07220 WP_209611760.1 1528330..1529772(-) (comH) [Helicobacter pylori strain MT5135]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCCAAACAGGTTTTAGGCATTT
ATAATATCTCCTCACACAAAAAACTCACGCTCACTATCACCCACATATCCACCGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCCAACCGCCCTACTATCCCTAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAACCACACTCAAACCCAATACCTTCTTTAAACGCGTCCATGCAAAAACCACAAAATAAACCCAGCTCATCGC
AACAATCCCCTCAAAACTTTTCTTACCCAGAGTCCAAACTAAGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAGTAAGCCCTGCTAATGAAGTTAAAACGCCAACAAACGACGCTAATCCCCCTTTAAAGCATTCTTC
ACAAGATCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAATAACAACACCCCTAACGCTGATG
CGAGTGAAAACAATGAAAGCAACGAAAATAGGGATAATGTGGAAAAACAAGCGATTAGAGATCCTAATATCAAAGAATTC
GCATGCGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATAAAGACAA
AGAGGTTACAACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAGATCATTACCCCCTATACTA
AAATTTCTGTTCATAAAACAGAGCCTTTAGAAGACCCTCAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTCCAAGCA
AGAAGCTCTACAGAAAAGTGTAAAAGGGCTAGAGCGAGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCC
TTTAAAACAAGCATGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACG
ATCAAACAGAGCCAACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAA
TTGAATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAAGGGCATTATTTAAACGATATAATCAAAGAGAGCAG
TGAATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAGAACAGCCAC
GAGCCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTATGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTT
TAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.875	100	0.919