Detailed information NTG0549660

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: J5D27_RS06870
• Genome accession: NZ_CP071981
• Coordinates: 1458299..1459735 (+)
• Length: 478 a.a.
• NCBI ID: WP_209525750.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain MT5111
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1453299..1464735

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J5D27_RS06850 (J5D27_06850)	glmS	1453935..1455728 (-)	1794	WP_209525747.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
J5D27_RS06855 (J5D27_06855)	-	1455729..1455968 (-)	240	WP_000461837.1	DUF2443 domain-containing protein	-
J5D27_RS06860 (J5D27_06860)	-	1456003..1456545 (-)	543	WP_209526659.1	purine-nucleoside phosphorylase	-
J5D27_RS06865 (J5D27_06865)	dnaA	1456697..1458070 (+)	1374	WP_209525749.1	chromosomal replication initiator protein DnaA	-
J5D27_RS06870 (J5D27_06870)	comH	1458299..1459735 (+)	1437	WP_209525750.1	competence protein	Machinery gene
J5D27_RS06880 (J5D27_06880)	-	1459915..1460667 (+)	753	WP_000767528.1	exodeoxyribonuclease III	-
J5D27_RS06885 (J5D27_06885)	-	1460664..1461299 (-)	636	WP_000668072.1	outer membrane protein	-
J5D27_RS06890 (J5D27_06890)	-	1461303..1461650 (-)	348	WP_000837049.1	hypothetical protein	-
J5D27_RS06895 (J5D27_06895)	recG	1461727..1463598 (+)	1872	WP_209525752.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 478 a.a.
• Molecular weight: 54582.41 Da
• Isoelectric Point: 7.1642

>NTDB_id=549660 J5D27_RS06870 WP_209525750.1 1458299..1459735(+) (comH) [Helicobacter pylori strain MT5111]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPKQVLGVYNISSHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKEPHSNPTPSLNAPMQKPQNKPHSSQQSPQNFSYPESKLGSKNSKNSLLQPL
VTPSKVNSTNETQTTLNPPLKHSSQDQENNLFVAPPTEKTLPSNNTPNADASENNESNENNRDNVEKQAIRDPNIKEFAC
GKWVYDDENLQAYRPSILKRIDKDKEVTTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQARS
STEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQIEPTFYETSELAYSSTRKSEITRNELN
LNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1437 bp

>NTDB_id=549660 J5D27_RS06870 WP_209525750.1 1458299..1459735(+) (comH) [Helicobacter pylori strain MT5111]
ATGAAAAAATCCCTTTGTTTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAACTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAAGCTAAAGTCCTTGATTCCAAAGAACCCAAACAAGTTTTGGGCGTTT
ATAATATCTCCTCACACAAAAAACTCACGCTCACTATCACCCACATATCCACCGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCTAACCGCCCTACTATCCCTAGAAACACCCAAATCGTTTTTTCTTCAAAAGA
ATTGAAAGAACCGCACTCAAACCCAACACCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCCATTCATCGC
AACAATCTCCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAACCTTTA
GTAACTCCTAGCAAAGTAAACTCTACTAACGAAACTCAAACGACACTAAACCCCCCCTTAAAACATTCTTCACAAGATCA
AGAAAACAACCTCTTTGTAGCGCCACCCACTGAAAAAACGCTCCCTAGTAACAACACCCCTAACGCTGATGCGAGTGAAA
ACAATGAAAGCAATGAAAATAATAGGGATAATGTGGAAAAACAAGCGATTAGAGATCCTAATATTAAGGAATTTGCATGC
GGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCATTGATAAAGACAAAGAAGT
TACAACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAATCT
CTGTTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTTCAAGCCAGAAGC
TCTACAGAAAAATGCAAAAGGGCTAGGGCGAGAAAAGACGGCACGACCAGGCAATGCTATCTGATAGAAGAGCCTTTAAA
ACAAGCATGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCGTATATGAACGCCCCAAACAAGACGATCAAA
TAGAGCCAACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTGAAT
TTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAGTGAATA
CAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAGAGCAACCACGAGCCA
AAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.684	100	0.923