Detailed information NTG0549638

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: J5D24_RS06940
• Genome accession: NZ_CP071978
• Coordinates: 1471557..1472981 (+)
• Length: 474 a.a.
• NCBI ID: WP_209507833.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain MT5125
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1466557..1477981

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J5D24_RS06920 (J5D24_06920)	glmS	1467185..1468978 (-)	1794	WP_209507830.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
J5D24_RS06925 (J5D24_06925)	-	1468979..1469218 (-)	240	WP_000461837.1	DUF2443 domain-containing protein	-
J5D24_RS06930 (J5D24_06930)	-	1469261..1469803 (-)	543	WP_209507831.1	purine-nucleoside phosphorylase	-
J5D24_RS06935 (J5D24_06935)	dnaA	1469955..1471328 (+)	1374	WP_000380634.1	chromosomal replication initiator protein DnaA	-
J5D24_RS06940 (J5D24_06940)	comH	1471557..1472981 (+)	1425	WP_209507833.1	competence protein	Machinery gene
J5D24_RS06950 (J5D24_06950)	-	1473161..1473913 (+)	753	WP_078252911.1	exodeoxyribonuclease III	-
J5D24_RS06955 (J5D24_06955)	-	1473910..1474545 (-)	636	WP_097707181.1	outer membrane protein	-
J5D24_RS06960 (J5D24_06960)	-	1474549..1474896 (-)	348	WP_097707182.1	hypothetical protein	-
J5D24_RS06965 (J5D24_06965)	recG	1474973..1476844 (+)	1872	WP_097707188.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 474 a.a.
• Molecular weight: 54177.00 Da
• Isoelectric Point: 7.0001

>NTDB_id=549638 J5D24_RS06940 WP_209507833.1 1471557..1472981(+) (comH) [Helicobacter pylori strain MT5125]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPKQVLGVYNISSHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKEPHSNPTPSLNAPMQKPQNKPHSSQQSPQNFSYPESKLGSKNSKNSLLQPL
ITPSKVNSTNETQTTLNPPLKHSSQDQENNLFVAPPTEKTLPSNNTPNADINESNENRDNVEKQAIRDPNIKEFACGKWV
YDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFTILQARSSTEK
CKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEITHNELNLNEK
FMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1425 bp

>NTDB_id=549638 J5D24_RS06940 WP_209507833.1 1471557..1472981(+) (comH) [Helicobacter pylori strain MT5125]
ATGAAAAAATCCCTTTGTTTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAACTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAAGCTAAAGTCCTTGATTCCAAAGAACCCAAACAAGTTTTGGGCGTTT
ATAATATCTCCTCACACAAAAAACTCACGCTCACTATCACCCACATATCCACCGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCTAACCGCCCTACTATCCCTAGAAACACCCAAATCGTTTTTTCTTCAAAAGA
ATTGAAAGAACCGCACTCAAACCCAACACCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCCATTCATCGC
AACAATCTCCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAACCTTTA
ATAACTCCTAGCAAAGTAAACTCTACTAACGAAACTCAAACGACACTAAACCCCCCCTTAAAACATTCTTCACAAGATCA
AGAAAACAACCTCTTTGTAGCGCCACCCACTGAAAAAACGCTCCCTAGTAACAACACCCCTAACGCTGATATTAATGAAA
GCAATGAGAATAGGGACAATGTGGAAAAACAAGCGATTAGAGATCCTAATATTAAAGAATTTGCATGCGGGAAGTGGGTC
TATGACGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACAGACTGCGACAGATAT
TACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAATCTCTGTTCATAAAA
CAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTTACGATTCTTCAAGCCAGAAGCTCTACAGAAAAG
TGTAAAAGGGCCAGAGCAAGAAAAGACGGCACGACTAGGCAATGTTATCTAATAGAAGAGCCTTTAAAACAAGCGTGGGA
GAGTGAATATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATCAAATAGAGCCGACTT
TTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCATAATGAATTGAATTTGAATGAAAAA
TTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTGAACGATATAATCAAAGAAAGCAGTGAATACAAAGAATGGGT
TAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCTTTAGAAATAGAAGAACAACCACGAGCCAAAAGCACGCCTT
TGAGTATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.708	100	0.939