Detailed information NTG0549616

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: J5D22_RS06850
• Genome accession: NZ_CP071977
• Coordinates: 1453635..1455077 (+)
• Length: 480 a.a.
• NCBI ID: WP_021172060.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain MT5105
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1448635..1460077

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J5D22_RS06830 (J5D22_06830)	glmS	1449268..1451061 (-)	1794	WP_209505713.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
J5D22_RS06835 (J5D22_06835)	-	1451062..1451301 (-)	240	WP_000461837.1	DUF2443 domain-containing protein	-
J5D22_RS06840 (J5D22_06840)	-	1451344..1451886 (-)	543	WP_209505715.1	purine-nucleoside phosphorylase	-
J5D22_RS06845 (J5D22_06845)	dnaA	1452038..1453405 (+)	1368	WP_209505717.1	chromosomal replication initiator protein DnaA	-
J5D22_RS06850 (J5D22_06850)	comH	1453635..1455077 (+)	1443	WP_021172060.1	hypothetical protein	Machinery gene
J5D22_RS06860 (J5D22_06860)	-	1455257..1456009 (+)	753	WP_001980979.1	exodeoxyribonuclease III	-
J5D22_RS06865 (J5D22_06865)	-	1456006..1456641 (-)	636	WP_021172059.1	outer membrane protein	-
J5D22_RS06870 (J5D22_06870)	-	1456645..1456992 (-)	348	WP_209505719.1	hypothetical protein	-
J5D22_RS06875 (J5D22_06875)	recG	1457069..1458940 (+)	1872	WP_209505721.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 480 a.a.
• Molecular weight: 54738.60 Da
• Isoelectric Point: 7.1209

>NTDB_id=549616 J5D22_RS06850 WP_021172060.1 1453635..1455077(+) (comH) [Helicobacter pylori strain MT5105]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KFSLETTLSPNRPTIPRNTQIVFSSKELKEPHSNPIPSLNAPMQKPQNKPSSSQQSPQNFSYPESKLGSKNSKNSLLQPL
VTPSKVSPANEVKTPTNDANPPLKHSSQDQENNLFVAPPTEKTLPNNNTPNADASENNESNENRDNVEKQAIRDPNIKEF
ACGKWVYDDENLQAYRPSILKRVDKDKEVTTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQA
RSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQTEPTFYETSELAYSSTRKSEITRNE
LNLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1443 bp

>NTDB_id=549616 J5D22_RS06850 WP_021172060.1 1453635..1455077(+) (comH) [Helicobacter pylori strain MT5105]
ATGAAAAAATCCCTTTGTTTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCCAAAGAACCCAGACAGGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAATTTTCTTTAGAAACGACCTTAAGCCCCAACCGCCCTACTATTCCCAGAAACACCCAAATCGTTTTTTCTTCAAAGGA
ATTGAAAGAACCGCACTCAAACCCAATACCTTCTTTAAACGCACCCATGCAAAAACCACAAAATAAACCCAGCTCATCGC
AACAATCCCCTCAAAACTTTTCCTATCCAGAATCCAAATTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAGTAAGCCCTGCTAATGAAGTTAAAACGCCAACAAATGACGCTAATCCCCCTTTAAAGCATTCTTC
ACAAGATCAAGAAAATAACCTTTTTGTAGCGCCACCCACTGAAAAAACGCTCCCTAATAACAACACCCCTAACGCTGATG
CGAGCGAAAACAATGAAAGCAACGAAAATAGGGATAATGTGGAAAAACAAGCGATTAGAGATCCCAATATTAAGGAATTC
GCATGCGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATAAAGATAA
AGAGGTTACAACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAGATCATTACCCCCTATACTA
AAATCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCTCAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTCCAAGCC
AGAAGCTCTACAGAAAAGTGTAAAAGGGCTAGAGCGAGAAAAGACGGCACGACCAGACAATGCTATCTGATAGAAGAGCC
TTTAAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCGTATATGAACGCCCCAAACAAGACG
ATCAAACAGAACCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAA
TTGAATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAAGGGCATTATTTAAACGATATAATCAAAGAGAGTAG
CGAATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAGAGCAACCAC
GAGCCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTT
TAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.5	100	0.925