Detailed information NTG0549596

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: J4T92_RS06645
• Genome accession: NZ_CP071975
• Coordinates: 1399597..1401024 (+)
• Length: 475 a.a.
• NCBI ID: WP_209552859.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain MT5118
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1394597..1406024

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J4T92_RS06625 (J4T92_06625)	glmS	1395232..1397025 (-)	1794	WP_209552857.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
J4T92_RS06630 (J4T92_06630)	-	1397026..1397265 (-)	240	WP_000461837.1	DUF2443 domain-containing protein	-
J4T92_RS06635 (J4T92_06635)	-	1397300..1397842 (-)	543	WP_209552858.1	purine-nucleoside phosphorylase	-
J4T92_RS06640 (J4T92_06640)	dnaA	1397995..1399368 (+)	1374	WP_021173903.1	chromosomal replication initiator protein DnaA	-
J4T92_RS06645 (J4T92_06645)	comH	1399597..1401024 (+)	1428	WP_209552859.1	competence protein	Machinery gene
J4T92_RS06655 (J4T92_06655)	-	1401204..1401956 (+)	753	WP_079371542.1	exodeoxyribonuclease III	-
J4T92_RS06660 (J4T92_06660)	-	1401953..1402588 (-)	636	WP_000668053.1	outer membrane protein	-
J4T92_RS06665 (J4T92_06665)	-	1402592..1402939 (-)	348	WP_209552860.1	hypothetical protein	-
J4T92_RS06670 (J4T92_06670)	recG	1403021..1404892 (+)	1872	WP_209552861.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 475 a.a.
• Molecular weight: 54183.01 Da
• Isoelectric Point: 6.6633

>NTDB_id=549596 J4T92_RS06645 WP_209552859.1 1399597..1401024(+) (comH) [Helicobacter pylori strain MT5118]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHSNPIPSLNAPMQKPQNKPHSSQQSPQNFSYPEPKLGSKNSKNSLLQPL
VTPSKTSSANEVKTPTNDANPPLKHSSEDQENNLFVAPPTEKTLPNAGIDENNESNENKDNVEKQAVRDPNVKEFACGKW
VYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQARSSTE
KCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITHNELNLNE
KFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1428 bp

>NTDB_id=549596 J4T92_RS06645 WP_209552859.1 1399597..1401024(+) (comH) [Helicobacter pylori strain MT5118]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTCATTGAGCTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACAATCACTCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAGATTGTTTTTTCTTCAAAGGA
ATTGAAAGAATCGCACTCAAACCCAATACCTTCTTTAAACGCACCCATGCAAAAACCACAAAACAAACCCCATTCATCGC
AACAATCTCCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAACAAGCTCCGCTAATGAAGTTAAAACGCCAACAAACGACGCTAATCCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTTTTTGTAGCGCCACCCACTGAAAAAACGCTCCCTAACGCTGGTATTGATGAAAACAATG
AAAGCAATGAGAATAAAGATAATGTGGAAAAACAAGCCGTTAGAGATCCCAATGTTAAAGAATTTGCATGCGGGAAGTGG
GTTTATGATGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACAGACTGCGACAGA
TATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTACACTAAAATCTCCGTTCATA
AAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTTCAAGCCAGAAGCTCTACGGAA
AAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACGACTAGGCAATGCTATCTAATAGAAGAGCCTTTAAAACAAGCATG
GGAAAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAACGCCCCAAACAAGACGACCAAGTAGAGCCAA
CTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCACAACGAATTGAATTTGAATGAA
AAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAAAGCAGTGAATACAAAGAATG
GGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAGCCAAAAGCACGC
CTTTGAGCATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	93.946	100	0.947