Detailed information NTG0549550

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: J5N61_RS08030
• Genome accession: NZ_CP071973
• Coordinates: 1709816..1710544 (+)
• Length: 242 a.a.
• NCBI ID: WP_227545354.1
• Uniprot ID: -
• Organism: Acinetobacter junii strain INC8271
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1704816..1715544

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J5N61_RS07995 (J5N61_07995)	-	1704911..1705897 (+)	987	WP_005402538.1	DNA polymerase III subunit delta'	-
J5N61_RS08000 (J5N61_08000)	-	1706001..1706747 (+)	747	WP_004912080.1	IS5 family transposase	-
J5N61_RS08005 (J5N61_08005)	-	1706984..1707328 (+)	345	WP_005402539.1	PilZ domain-containing protein	-
J5N61_RS08010 (J5N61_08010)	-	1707351..1708124 (+)	774	WP_005402540.1	TatD family hydrolase	-
J5N61_RS08015 (J5N61_08015)	-	1708163..1708771 (+)	609	WP_020899852.1	TetR/AcrR family transcriptional regulator	-
J5N61_RS08020 (J5N61_08020)	-	1708784..1709332 (+)	549	WP_005402541.1	Tfp pilus assembly protein FimT/FimU	-
J5N61_RS08025 (J5N61_08025)	xcpV	1709466..1709819 (+)	354	WP_042106585.1	type II secretion system protein	Machinery gene
J5N61_RS08030 (J5N61_08030)	xcpW	1709816..1710544 (+)	729	WP_227545354.1	type II secretion system minor pseudopilin GspJ	Machinery gene
J5N61_RS08035 (J5N61_08035)	gspK	1710541..1711500 (+)	960	WP_125272498.1	type II secretion system minor pseudopilin GspK	-
J5N61_RS08040 (J5N61_08040)	-	1711607..1712203 (+)	597	WP_004954093.1	6-pyruvoyl trahydropterin synthase family protein	-
J5N61_RS08045 (J5N61_08045)	ung	1712242..1712955 (+)	714	WP_075696551.1	uracil-DNA glycosylase	-
J5N61_RS08050 (J5N61_08050)	-	1712952..1714076 (+)	1125	WP_171053792.1	enoyl-CoA hydratase/isomerase family protein	-
J5N61_RS08055 (J5N61_08055)	tadA	1714083..1714586 (+)	504	WP_087539688.1	tRNA adenosine(34) deaminase TadA	-
J5N61_RS08060 (J5N61_08060)	-	1714653..1715093 (+)	441	WP_075696895.1	SRPBCC family protein	-

Sequence

Protein

• Length: 242 a.a.
• Molecular weight: 27945.27 Da
• Isoelectric Point: 9.0888

>NTDB_id=549550 J5N61_RS08030 WP_227545354.1 1709816..1710544(+) (xcpW) [Acinetobacter junii strain INC8271]
MKIKNVVMRLGFRFNVVSECQQSSTKSYLPKKIKSNLGFTLVELLVAIAIFAVLSMLGWKVFDYLIKVKDRNAEHETHLF
ELQDAYQQFLKDSMQIIPLTANDGRQLQAAMVLNDRSFSFSKAGVSDPLKQDLSPYERIEYRYDAQQKKVYRLKYTNLNI
PNRVQPVSSTLLENVDQFRILILNPQEISQWPENINDPNNVNELKKLPLGFKVQLTIAGSDYEWIYSLLNANQLLVNLET
PP

Nucleotide

• Length: 729 bp

>NTDB_id=549550 J5N61_RS08030 WP_227545354.1 1709816..1710544(+) (xcpW) [Acinetobacter junii strain INC8271]
ATGAAAATCAAGAATGTTGTAATGAGGTTGGGTTTCAGATTTAATGTTGTCTCAGAATGTCAGCAAAGTTCAACTAAGTC
TTATTTACCTAAAAAAATTAAGAGTAATTTAGGTTTTACTTTAGTTGAGTTGCTTGTTGCGATTGCGATATTTGCAGTGC
TTTCAATGTTGGGGTGGAAAGTTTTTGATTATCTCATCAAAGTGAAAGATAGAAATGCAGAACATGAAACACACTTATTT
GAATTACAGGATGCTTATCAGCAATTTTTAAAAGATAGCATGCAGATAATTCCATTGACTGCAAATGATGGGCGACAATT
ACAAGCAGCTATGGTTTTGAATGATCGAAGTTTTAGTTTTAGTAAGGCTGGGGTATCTGATCCATTGAAGCAAGATCTTT
CACCATATGAGCGAATAGAATACAGATATGATGCGCAACAAAAAAAAGTTTACCGTTTGAAATATACAAATTTAAATATT
CCAAATCGTGTGCAACCAGTATCAAGCACTTTACTTGAAAATGTAGATCAATTTAGAATTTTGATTTTAAATCCACAAGA
AATTAGCCAATGGCCTGAAAATATTAATGATCCAAATAATGTAAATGAATTAAAGAAGTTACCATTAGGTTTTAAAGTTC
AATTGACGATTGCTGGTTCAGATTATGAGTGGATTTATAGTTTATTAAATGCCAATCAGTTATTGGTCAATCTGGAAACT
CCACCATGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (34-57)

• Type II secretion system (T2SS), protein J (T2SSJ) (91-219)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	71.728	78.926	0.566