Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   J5N61_RS03470 Genome accession   NZ_CP071973
Coordinates   739736..740119 (+) Length   127 a.a.
NCBI ID   WP_004640629.1    Uniprot ID   -
Organism   Acinetobacter junii strain INC8271     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 734736..745119
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J5N61_RS03440 (J5N61_03440) - 735237..735572 (+) 336 WP_125272088.1 DUF2004 domain-containing protein -
  J5N61_RS03445 (J5N61_03445) - 735597..735947 (+) 351 WP_125272087.1 DUF488 domain-containing protein -
  J5N61_RS03450 (J5N61_03450) - 736030..736374 (+) 345 WP_125272086.1 zinc ribbon domain-containing protein YjdM -
  J5N61_RS03455 (J5N61_03455) - 736518..736853 (+) 336 WP_125272085.1 YegP family protein -
  J5N61_RS03460 (J5N61_03460) - 736913..738628 (-) 1716 WP_125272084.1 proline--tRNA ligase -
  J5N61_RS03465 (J5N61_03465) - 738787..739455 (-) 669 WP_125272083.1 hypothetical protein -
  J5N61_RS03470 (J5N61_03470) pilG 739736..740119 (+) 384 WP_004640629.1 twitching motility response regulator PilG Regulator
  J5N61_RS03475 (J5N61_03475) - 740140..740502 (+) 363 WP_004664659.1 response regulator -
  J5N61_RS03480 (J5N61_03480) - 740541..741077 (+) 537 WP_004908738.1 chemotaxis protein CheW -
  J5N61_RS03485 (J5N61_03485) - 741124..743211 (+) 2088 WP_004963889.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14199.33 Da        Isoelectric Point: 4.7278

>NTDB_id=549547 J5N61_RS03470 WP_004640629.1 739736..740119(+) (pilG) [Acinetobacter junii strain INC8271]
MEDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSLNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLSAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=549547 J5N61_RS03470 WP_004640629.1 739736..740119(+) (pilG) [Acinetobacter junii strain INC8271]
ATGGAAGATAAATTTCAAAATTTAAAAGTAATGGTGATTGACGATTCTAAAACGATTCGACGTACAGCTGAGACACTGTT
ACAACGCGAAGGTTGTGAGGTGATTACAGCTGTCGATGGTTTTGAAGCATTATCGAAAATTGCGGAAGCAAATCCTGATA
TCGTATTTGTCGATATTATGATGCCTCGTCTAGATGGTTACCAAACCTGTGCATTAATTAAAAACTCTCTAAATTATCAA
AATATTCCAGTAATCATGTTATCAAGCAAAGATGGTTTGTTTGATCAAGCCAAAGGGCGTGTTGTGGGGTCAGATGAATA
TTTAACTAAGCCATTTAGTAAAGATGAGCTGTTAAGTGCGATTCGTAACCACGTAAGCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.85

100

0.969
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.228

89.764

0.37