Detailed information NTG0549543

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: LTK16_RS07410
• Genome accession: NZ_CP089162
• Coordinates: 1453884..1454966 (-)
• Length: 360 a.a.
• NCBI ID: WP_001548033.1
• Uniprot ID: A0A0H2XJ41
• Organism: Staphylococcus aureus strain UNC_SaCF11
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1448884..1459966

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LTK16_RS07390 (LTK16_07390)	-	1449493..1449597 (-)	105	WP_001790092.1	hypothetical protein	-
LTK16_RS07395 (LTK16_07395)	secA	1449639..1452170 (-)	2532	WP_000506531.1	preprotein translocase subunit SecA	-
LTK16_RS07400 (LTK16_07400)	hpf	1452584..1453156 (-)	573	WP_000617735.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
LTK16_RS07405 (LTK16_07405)	-	1453217..1453891 (-)	675	WP_001057965.1	ComF family protein	-
LTK16_RS07410 (LTK16_07410)	comFA	1453884..1454966 (-)	1083	WP_001548033.1	DEAD/DEAH box helicase	Machinery gene
LTK16_RS07415 (LTK16_07415)	fakB1	1455330..1456196 (-)	867	WP_000686342.1	fatty acid kinase binding subunit FakB1	-
LTK16_RS07420 (LTK16_07420)	-	1456340..1456981 (+)	642	WP_000192947.1	YigZ family protein	-
LTK16_RS07425 (LTK16_07425)	-	1457151..1458206 (-)	1056	WP_000258151.1	glycosyltransferase family 4 protein	-
LTK16_RS07430 (LTK16_07430)	-	1458524..1459594 (+)	1071	WP_000460983.1	GGDEF domain-containing protein	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 42111.65 Da
• Isoelectric Point: 9.8307

>NTDB_id=549543 LTK16_RS07410 WP_001548033.1 1453884..1454966(-) (comFA) [Staphylococcus aureus strain UNC_SaCF11]
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRKRQTILLYAVTGAGKTEMMFQGIQYARIQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSRQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKNLQQALKSSSK
VEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNKKIQKMLYRILQDQINNQRYTLVFFNNIETM
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQRMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=549543 LTK16_RS07410 WP_001548033.1 1453884..1454966(-) (comFA) [Staphylococcus aureus strain UNC_SaCF11]
ATGGATAATGTAACAAGATATAAAATAACAGAGAGTTCGCAAAGTTCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAGCAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAAAGAGACAAACGATTTTGTTATATGCCGTAA
CAGGTGCAGGTAAGACAGAAATGATGTTTCAAGGCATTCAATATGCAAGAATACAGGGAGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGACAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAATTTACAACAAGCATTGAAGTCATCTTCTAAA
GTTGAACATGCAACAATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGTTATTTCAAACTTAATAATAAGAAGATTCAGA
AAATGTTATACCGAATTTTACAAGATCAAATTAATAATCAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGGTTTATAAGCAGAAAATTACTAAATTAACATACGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACATTTCGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TGGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTTCATGAAGGGGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAG
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (215-318)

• Type III restriction enzyme, res subunit (ResIII) (25-173)

3D structure

• AlphaFold DB: A0A0H2XJ41

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	38.938	94.167	0.367