Detailed information NTG0549364

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: LTK20_RS07285
• Genome accession: NZ_CP089159
• Coordinates: 1393475..1394557 (-)
• Length: 360 a.a.
• NCBI ID: WP_001548033.1
• Uniprot ID: A0A0H2XJ41
• Organism: Staphylococcus aureus strain UNC_SaCF18
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1388475..1399557

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LTK20_RS07265 (LTK20_07265)	-	1389084..1389188 (-)	105	WP_001790092.1	hypothetical protein	-
LTK20_RS07270 (LTK20_07270)	secA	1389230..1391761 (-)	2532	WP_000506531.1	preprotein translocase subunit SecA	-
LTK20_RS07275 (LTK20_07275)	hpf	1392175..1392747 (-)	573	WP_000617735.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
LTK20_RS07280 (LTK20_07280)	-	1392808..1393482 (-)	675	WP_031883644.1	ComF family protein	-
LTK20_RS07285 (LTK20_07285)	comFA	1393475..1394557 (-)	1083	WP_001548033.1	DEAD/DEAH box helicase	Machinery gene
LTK20_RS07290 (LTK20_07290)	fakB1	1394921..1395787 (-)	867	WP_000686342.1	fatty acid kinase binding subunit FakB1	-
LTK20_RS07295 (LTK20_07295)	-	1395931..1396572 (+)	642	WP_000192947.1	YigZ family protein	-
LTK20_RS07300 (LTK20_07300)	-	1396742..1397797 (-)	1056	WP_000258151.1	glycosyltransferase family 4 protein	-
LTK20_RS07305 (LTK20_07305)	-	1398115..1399185 (+)	1071	WP_000460983.1	GGDEF domain-containing protein	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 42111.65 Da
• Isoelectric Point: 9.8307

>NTDB_id=549364 LTK20_RS07285 WP_001548033.1 1393475..1394557(-) (comFA) [Staphylococcus aureus strain UNC_SaCF18]
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRKRQTILLYAVTGAGKTEMMFQGIQYARIQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSRQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKNLQQALKSSSK
VEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNKKIQKMLYRILQDQINNQRYTLVFFNNIETM
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQRMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=549364 LTK20_RS07285 WP_001548033.1 1393475..1394557(-) (comFA) [Staphylococcus aureus strain UNC_SaCF18]
ATGGATAATGTAACAAGATATAAAATAACAGAGAGTTCGCAAAGTTCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAGCAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAAAGAGACAAACGATTTTGTTATATGCCGTAA
CAGGTGCAGGTAAGACAGAAATGATGTTTCAAGGCATTCAATATGCAAGAATACAGGGAGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGACAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAATTTACAACAAGCATTGAAGTCATCTTCTAAA
GTTGAACATGCAACAATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGTTATTTCAAACTTAATAATAAGAAGATTCAGA
AAATGTTATACCGAATTTTACAAGATCAAATTAATAATCAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGGTTTATAAGCAGAAAATTACTAAATTAACATACGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACATTTCGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TGGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTTCATGAAGGGGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAG
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (215-318)

• Type III restriction enzyme, res subunit (ResIII) (25-173)

3D structure

• AlphaFold DB: A0A0H2XJ41

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	38.938	94.167	0.367