Detailed information NTG0549359

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: J4771_RS09410
• Genome accession: NZ_CP071953
• Coordinates: 2018776..2019885 (-)
• Length: 369 a.a.
• NCBI ID: WP_224134767.1
• Uniprot ID: -
• Organism: Candidatus Kaistella beijingensis strain PM-38
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2013776..2024885

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J4771_RS09380 (J4771_09345)	-	2014147..2015223 (+)	1077	WP_224134761.1	calcium:proton antiporter	-
J4771_RS09385 (J4771_09350)	-	2015220..2015609 (-)	390	WP_224134762.1	group III truncated hemoglobin	-
J4771_RS09390 (J4771_09355)	-	2015837..2015983 (+)	147	WP_224134763.1	hypothetical protein	-
J4771_RS09395 (J4771_09360)	-	2016178..2016669 (+)	492	WP_224134764.1	YkgJ family cysteine cluster protein	-
J4771_RS09400 (J4771_09365)	-	2016780..2017067 (+)	288	WP_224134765.1	hypothetical protein	-
J4771_RS09405 (J4771_09370)	gdhA	2017232..2018590 (-)	1359	WP_224134766.1	NADP-specific glutamate dehydrogenase	-
J4771_RS09410 (J4771_09375)	dprA	2018776..2019885 (-)	1110	WP_224134767.1	DNA-processing protein DprA	Machinery gene
J4771_RS09415 (J4771_09380)	-	2019935..2020720 (-)	786	WP_224134768.1	rhomboid family intramembrane serine protease	-
J4771_RS09420 (J4771_09385)	-	2020872..2021981 (+)	1110	WP_224134769.1	DUF3078 domain-containing protein	-
J4771_RS09425 (J4771_09390)	-	2021994..2022259 (+)	266	Protein_1847	hypothetical protein	-
J4771_RS09430 (J4771_09395)	-	2022314..2023849 (-)	1536	WP_224134770.1	YifB family Mg chelatase-like AAA ATPase	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 40960.15 Da
• Isoelectric Point: 7.5328

>NTDB_id=549359 J4771_RS09410 WP_224134767.1 2018776..2019885(-) (dprA) [Candidatus Kaistella beijingensis strain PM-38]
MFSEETLYTIALRHCPLVGDIIFRKLVSEIGSAKEVWLLSKSGLRNIYGIGKKISHEIGNDEHLKFAEKELKFCEKHHVK
INLRHLGHLPKFLNECDDAPAILYQKGDLDSSLKPISIVGTRNVTTYGKHFIQDFLEAVKNKNLVTVSGLALGVDTEVHE
ESLKNNIPTIAVLAHGFHTLYPTKNRKLSDKILEENGVLFTEFNTSQKPDRENFIQRNRVIAGLSPSTIVVETAFGGGSI
STATFASNYNREVFALPGKISDKYSQGCNQLIFQNKAAIISTVSSLIEQLGFQKDSSKIGELFPTSEIKIQLPESQQIIL
NSLDKAVPLSLDEIAGKIDLPTFKILPDLLQLEISGFVKALSGRQYLAL

Nucleotide

• Length: 1110 bp

>NTDB_id=549359 J4771_RS09410 WP_224134767.1 2018776..2019885(-) (dprA) [Candidatus Kaistella beijingensis strain PM-38]
ATGTTTTCCGAAGAAACCCTTTATACCATCGCGCTTCGCCATTGCCCTTTAGTTGGCGATATTATCTTCCGGAAACTGGT
TAGTGAAATAGGTTCTGCAAAGGAAGTTTGGTTGCTTTCTAAATCGGGATTAAGAAACATTTACGGCATCGGCAAAAAAA
TTTCACATGAAATCGGAAACGATGAACATTTGAAGTTTGCAGAAAAAGAACTCAAATTTTGTGAAAAGCACCATGTCAAA
ATCAACCTTCGTCATCTTGGACATTTGCCCAAATTTTTGAATGAATGTGATGATGCTCCTGCAATTCTTTATCAAAAAGG
AGATTTAGATTCTTCTCTAAAACCCATAAGCATCGTAGGAACAAGGAATGTCACGACATACGGAAAACATTTTATCCAAG
ATTTTTTAGAAGCGGTAAAAAACAAAAACTTAGTCACAGTCAGCGGACTTGCTTTAGGTGTTGATACAGAAGTTCATGAA
GAGTCGCTTAAAAACAACATTCCTACCATTGCAGTTTTGGCGCATGGTTTTCACACGCTATATCCAACAAAAAACAGAAA
GCTTTCTGACAAAATTTTAGAAGAAAACGGCGTTTTGTTCACCGAATTCAACACGTCCCAAAAACCGGACCGCGAGAACT
TCATTCAAAGAAACCGTGTTATTGCAGGACTTTCTCCCTCTACAATTGTTGTGGAAACTGCTTTTGGAGGGGGTTCAATC
AGCACGGCAACTTTTGCCAGCAATTACAATCGCGAAGTTTTTGCTTTACCCGGAAAAATTTCCGACAAATACAGCCAAGG
TTGCAATCAGTTGATTTTTCAGAATAAAGCAGCAATCATTTCTACAGTATCTTCGCTTATAGAACAGCTTGGTTTTCAAA
AAGATAGTTCCAAAATTGGCGAACTTTTTCCAACTTCGGAAATTAAAATTCAGTTACCGGAAAGTCAGCAAATTATTTTG
AACTCCTTGGACAAAGCCGTACCTTTATCTCTAGACGAAATTGCTGGAAAAATAGATTTACCCACCTTCAAAATTTTGCC
AGATTTGCTTCAACTGGAAATTTCTGGTTTTGTGAAGGCGCTTTCTGGGAGACAATATCTTGCACTTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-280)

• DprA winged helix domain (DprA_WH) (311-363)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	55.22	98.645	0.545