Detailed information NTG0549288

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: J5F39_RS05070
• Genome accession: NZ_CP071936
• Coordinates: 1039473..1040786 (-)
• Length: 437 a.a.
• NCBI ID: WP_198932103.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain MTT03
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1034473..1045786

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J5F39_RS05040	nadC	1034936..1035757 (-)	822	WP_283491698.1	carboxylating nicotinate-nucleotide diphosphorylase	-
J5F39_RS05045	nadA	1035757..1036767 (-)	1011	WP_097724324.1	quinolinate synthase NadA	-
J5F39_RS05050	-	1036757..1037560 (-)	804	WP_097698276.1	phosphatidylserine decarboxylase	-
J5F39_RS05055	-	1037554..1038060 (-)	507	WP_000953090.1	hypothetical protein	-
J5F39_RS05060	-	1038073..1038567 (-)	495	WP_198929686.1	hypothetical protein	-
J5F39_RS05065	mqnP	1038560..1039402 (-)	843	WP_238409734.1	menaquinone biosynthesis prenyltransferase MqnP	-
J5F39_RS05070	comEC/comE3	1039473..1040786 (-)	1314	WP_198932103.1	ComEC/Rec2 family competence protein	Machinery gene
J5F39_RS05075	-	1040783..1042249 (-)	1467	WP_283491699.1	replicative DNA helicase	-
J5F39_RS05080	-	1042260..1043660 (-)	1401	WP_283491700.1	NAD(P)H-hydrate dehydratase	-
J5F39_RS05085	crdS	1043663..1044850 (-)	1188	WP_283492266.1	copper-sensing histidine kinase CrdS	-
J5F39_RS05090	crdR	1044831..1045472 (-)	642	WP_283491701.1	copper response regulator transcription factor CrdR	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50115.07 Da
• Isoelectric Point: 9.8688

>NTDB_id=549288 J5F39_RS05070 WP_198932103.1 1039473..1040786(-) (comEC/comE3) [Helicobacter pylori strain MTT03]
MKDKTFQGAFELLSTPKEYLWCGVVLSLLLAINLYLEYLNHQKLDFSKPTSLSAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHWRHFIDSAHSNALVGNLYRALFIGDSL
NKDLRDKANALGINHLLAISGFHLGILSVSVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLVLACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLARSFQAISLS
ALVFLNMLIIAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDRLLSMPLTIPTISIPSPLWLLGVHLCLT
ILSVRFFKVYLSMNVLSMGFFLYCCYQYIIMPSSIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=549288 J5F39_RS05070 WP_198932103.1 1039473..1040786(-) (comEC/comE3) [Helicobacter pylori strain MTT03]
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTTCAACCCCCAAAGAATACTTATGGTGTGGGGTTGTTTTAAG
CCTTTTATTGGCGATTAACCTTTATTTAGAATACTTGAATCACCAAAAGCTTGATTTTTCAAAACCTACAAGCCTGAGTG
CTCAAATCTTATTACAATACCCTAAGACTAAAGATCAAAAAACCTATTTTGTCTTAAAACTCCAATCAAAGGGCATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAATCTCCAATACCGCCACGCGCAATTTTTTGGCAAGATCAAGCCTTGTTC
GTTCTTAGAGTCTCTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACACGAAAACAAGATTTCAAATCGCATT
GGCGCCATTTCATTGACAGCGCTCATTCCAACGCTTTAGTGGGTAATTTGTATCGAGCGCTTTTTATAGGGGATAGCTTG
AATAAAGACTTAAGAGACAAGGCTAACGCGTTAGGGATCAACCACTTACTAGCCATTAGCGGGTTCCATTTAGGGATTTT
GAGCGTTAGCGTGTATTTTCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTGGGGTATTTGTTGCTATTAGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGGTTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTATTCTTAAAACACACTCAAGCCTTTTTTAAAACTTCTTCTTTTTTGGCGCGATCTTTTCAAGCCATAAGCTTAAGC
GCGCTGGTGTTTTTGAACATGCTCATTATCGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGCTTGTTCTTGCATGCTGTGGGTTTGGGGTCTTTGTTGGATCGCC
TTTTAAGCATGCCTTTAACAATCCCTACGATTTCAATCCCTTCGCCTTTATGGCTTTTAGGGGTGCATTTATGTTTAACG
ATTTTAAGCGTGCGTTTTTTTAAGGTTTATTTAAGCATGAATGTTTTAAGCATGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGTTCAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-371)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	96.11	100	0.961